Pairwise Alignments

Query, 805 a.a., DNA gyrase subunit B from Pseudomonas simiae WCS417

Subject, 805 a.a., DNA topoisomerase (ATP-hydrolyzing) (RefSeq) from Shewanella amazonensis SB2B

 Score = 1155 bits (2988), Expect = 0.0
 Identities = 576/802 (71%), Positives = 663/802 (82%), Gaps = 1/802 (0%)

Query: 4   ENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISI 63
           ENTYDS+SIKVLKGLDAVRKRPGMYIGDTDDG+GLHHMVFEVVDNSIDEALAGHC +I+I
Sbjct: 3   ENTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSEITI 62

Query: 64  IIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 123
            IH D S++V+D+GRGIPV +H EEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS
Sbjct: 63  TIHVDGSVSVKDDGRGIPVAIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 122

Query: 124 VVNALSEELILTVRRSGKIWEQTYVHGVPKEPMKIVGDSETTGTQIHFKPSAETFKNIHF 183
           VVNALS++L LT+RR GK+ EQ Y HGVP  P+K+VGD+  TGT++ F PS ETF +  F
Sbjct: 123 VVNALSKKLQLTIRRDGKVHEQFYTHGVPDAPIKVVGDATKTGTEVRFWPSEETFSDTLF 182

Query: 184 SWDILAKRIRELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQ-VFH 242
            +DILAKR+RELSFLNSGVGI L DER  K+E FKYEGG+ AFVEYLN NKT VN+ +FH
Sbjct: 183 HFDILAKRVRELSFLNSGVGIRLVDERDNKDEFFKYEGGISAFVEYLNRNKTPVNKDIFH 242

Query: 243 FNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNTYIEAEG 302
           F  +REDGI VE+A+QWND F EN+ CFTNNIPQRDGGTHL GFR ALTRNLN Y+EAEG
Sbjct: 243 FAQEREDGITVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRNLNNYMEAEG 302

Query: 303 LAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFL 362
             KK+K   TGDDAREGLTA+ISVKVPDPKFSSQTKDKLVSSEVK+AVEQ MG+   D+L
Sbjct: 303 YNKKNKTNATGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVKSAVEQTMGEKLGDYL 362

Query: 363 LENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELY 422
           LENP +AKL+VGK+IDAARAREAARKAREMTRRKGALD+ GLPGKLADCQEKDP LSE+Y
Sbjct: 363 LENPGDAKLIVGKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCQEKDPGLSEIY 422

Query: 423 LVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGRD 482
           +VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKM+SSQEV TLITALGCGIGRD
Sbjct: 423 IVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRD 482

Query: 483 EYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGK 542
           EY+ DK RYH IIIMTDADVDGSHIRTLLLTFFFRQ+PELIERGY+YIAQPPLYKVKKGK
Sbjct: 483 EYDPDKTRYHYIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYVYIAQPPLYKVKKGK 542

Query: 543 QEQYIKDDDAMEEYMTQSALEDASLHLNDEAPGISGESLERLVNDFRMVMKTLKRLSRLY 602
            EQY+KDD A+ E++T  AL+ AS+H +  APG+SGE LE+LVN +R V   + RL   Y
Sbjct: 543 HEQYLKDDPALTEFLTTGALDGASIHPSQGAPGMSGEPLEKLVNQYREVEGIIARLDLRY 602

Query: 603 PQELTEHFIYLPAVSLEQLGDHAAMQDWLAQYEVRLRTVEKSGLVYKASLREDRERNVWL 662
           P+ LT+  +Y P +S + L D A +Q W   +   L   E SG++Y A    D ER V++
Sbjct: 603 PEVLTDRMLYHPVLSNDILADQAKVQAWCDAFVADLVERESSGVLYNAVAEHDPERQVYV 662

Query: 663 PEVELISHGLSNYVTFNRDFFGSNDYKTVVTLGAQLSTLLDDGAYIQRGERKKQVKEFKE 722
           P+V L  HG+ +   F+ DFF S+DY+ +  L   L  L+++G Y+QRGE+ K V  F E
Sbjct: 663 PKVTLRRHGIDHEYLFSYDFFQSSDYRKMGALANALDGLIEEGGYVQRGEKVKPVTSFIE 722

Query: 723 ALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPAQRRMLRVTIEDAIGADQIFNTLM 782
           ALDWL+ ES +   IQRYKGLGEMNP+QLWETTMDP  RRML+VTIEDAI ADQ+F  LM
Sbjct: 723 ALDWLVGESKRGLYIQRYKGLGEMNPEQLWETTMDPESRRMLQVTIEDAIAADQLFTCLM 782

Query: 783 GDAVEPRRDFIESNALAVSNLD 804
           GD VEPRRDFIE+NAL V+NLD
Sbjct: 783 GDQVEPRRDFIEANALNVANLD 804