Pairwise Alignments

Query, 266 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 39/181 (21%), Positives = 86/181 (47%), Gaps = 7/181 (3%)

Query: 77  QMTPSLVIQFGLYLVPDLSKTAILFIGNVALAITILFLVLATSALLNALLDIYARTEHAR 136
           Q+  S+V  +   LV  L+  A+  +  + + + IL      + +   ++     +++ R
Sbjct: 277 QVVFSIVRHWSNSLVNWLASNAVQHLFQLFIFLLILLAAKGGAKVTRTVVRSAVNSKNIR 336

Query: 137 TRSIKG--YVQLAKMVLFVFGAIIIVATL-IDRSPLLLLSGLGAMSAVILLVYKDTLLSF 193
              +    +V ++  V++V G ++ ++ + ++ +P+L  +G G    +I    +DTL +F
Sbjct: 337 ISHLMQDFFVSMSGKVVWVIGILVGLSQIGLNLAPVL--TGFGIAGVIIGFALQDTLSNF 394

Query: 194 VASVQLTSNDMLRVGDWIEMPQVGADGDVVDITLHTVKVQNFDKTIVSIPTWRLMSESFK 253
            A + L       VGD++     G DG V  ++L    ++ FD  I+ +P  ++  +  K
Sbjct: 395 AAGMMLLIYRPFDVGDFVHAG--GVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIK 452

Query: 254 N 254
           N
Sbjct: 453 N 453