Pairwise Alignments

Query, 266 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

Subject, 412 a.a., mechanosensitive ion channel family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  169 bits (427), Expect = 1e-46
 Identities = 102/256 (39%), Positives = 157/256 (61%), Gaps = 18/256 (7%)

Query: 6   LWLNVQDLWGALDEHPLLHASLGLLVLLVVALLLGRVARYLILHAVKLLGRQPALH---- 61
           LWL   D+   ++    L  +LGL+  + +A+       +L+LH   LL  +   H    
Sbjct: 7   LWLQKFDI--EIERVIQLAEALGLIAAISIAI-------HLVLHRGVLLWLKRHTHHEQS 57

Query: 62  -WLNDLRHNKVFHRLAQMTPSLVI--QFGLYLVPDLSKTAILFIGNVALAITILFLVLAT 118
            W N L    +F R+A +   +VI  Q  L+L P+     +L    +     ++F +LAT
Sbjct: 58  VWRNALFKEHLFSRVALLIQGVVIAVQTQLWLSPNTFAYDVLH--TLTSLWIVVFGMLAT 115

Query: 119 SALLNALLDIYARTEHARTRSIKGYVQLAKMVLFVFGAIIIVATLIDRSPLLLLSGLGAM 178
            ++LN L  + +RT+  +    +G +Q  K+++F+  A+   + LI +SP++LLSGLGAM
Sbjct: 116 YSVLNVLELLISRTQVGKNLPTRGILQSIKLIVFIIAALFFTSILIGKSPVILLSGLGAM 175

Query: 179 SAVILLVYKDTLLSFVASVQLTSNDMLRVGDWIEMPQVGADGDVVDITLHTVKVQNFDKT 238
           +AV +LV+KD +L  VA VQL++N ML VGDW+EMP+ GADG V+DI+L TVKVQN+DKT
Sbjct: 176 TAVFMLVFKDPILGLVAGVQLSANKMLSVGDWLEMPKYGADGSVIDISLTTVKVQNWDKT 235

Query: 239 IVSIPTWRLMSESFKN 254
           I +IP++ L+S+SFKN
Sbjct: 236 ITTIPSYALISDSFKN 251