Pairwise Alignments

Query, 278 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 277 a.a., GntR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  273 bits (697), Expect = 4e-78
 Identities = 139/279 (49%), Positives = 191/279 (68%), Gaps = 3/279 (1%)

Query: 1   MALVGRYNSLQVVKHTNFGLYLDGAQDGEILLPNRYIPKDIPSEDEDWLNVFIYLDSDDK 60
           M  +G+ NSL+VVK   FG++LD  + G  LLP R++P+ I  E   +++VF+Y DS+++
Sbjct: 1   MINIGQINSLEVVKFAEFGVFLDAGEYGTTLLPKRFVPEGI--EIGQFIDVFLYFDSENQ 58

Query: 61  LIATTEKPKVQVGEFASLKVVEVNSIGVFLDWGLP-KDLLLPYSEEKRQLSAGEYCVVHV 119
           L ATTE P  QVGE+  +K+  VNS G F +WG+  KDLL+PYSE++ + +AG+  +V+V
Sbjct: 59  LAATTETPIAQVGEWGLMKIEGVNSTGAFANWGIKNKDLLIPYSEQRARFTAGQTVLVYV 118

Query: 120 YLDKHTKRITATARLDRYLDKTPANYQVGQEVDLLVAEATDMGFKAIINNKHWGLIHKNE 179
           Y DK + RI  T + +++LDKTPA Y   Q+VDLL+AE +++GFKAI+N  HWG+I  ++
Sbjct: 119 YTDKASGRIVGTTKFNKWLDKTPAKYTPNQQVDLLIAERSELGFKAIVNGTHWGMIFSSD 178

Query: 180 VFKFLRPGKEEKGFIKEIRADGNISLSLQPVGQEAASSLNSKILAKLRENNGSLPVSDKS 239
           VF  L  GK+ KG+IK +R DG I LSLQ VG E    L++KIL  L +  G LP+SDKS
Sbjct: 179 VFGKLFIGKKLKGYIKSVREDGKIDLSLQKVGVEKMDELSTKILETLEKKGGFLPLSDKS 238

Query: 240 DPAVISNLFGVSKGNFKKAIGALYKQGQIVIHADRIELS 278
            P  I   F  SKG FKK IG LYKQG+IVI  D I L+
Sbjct: 239 TPEAIFATFRTSKGTFKKTIGGLYKQGKIVIENDGIRLA 277