Pairwise Alignments

Query, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 75/301 (24%), Positives = 128/301 (42%), Gaps = 24/301 (7%)

Query: 8   LKLLRIFVSVVRHQGFANAQHELNLSTSAISTYMSQLESALGLVLCHRGRGGFSLTSKGE 67
           L+ + IF  V R   F++A  +L +S S +ST ++ LE  LG+ L  R     SLT  G+
Sbjct: 5   LEPIAIFTHVARAGSFSSAARKLGISKSKVSTQVADLEHKLGVQLIQRTTRSLSLTEAGQ 64

Query: 68  LFHQETLRLLGELEGFEQYAAALKGELRGTLKLGVLDSTVSDKALPFAEVIGAYSLEHPA 127
           L + +   LL + +        L    RG LK+G+  S  +   +P    +  +   HP 
Sbjct: 65  LLYAQGEELLRDADQAVASVHNLNDATRGVLKVGISQSFGTMHIIP---ALPDFMARHPE 121

Query: 128 VHLHLSVMSPYELQLGVQDNRLDLAIGAFSNRMSGLIYMPLYREQHWLYCSTRHSL---F 184
           + L +S++   + ++ V    LDL +        G++  PL + Q  L  S  +     +
Sbjct: 122 LELQVSLL---DHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLAASPEYVAKHGY 178

Query: 185 NERRIPEQVITQQRMVGRGYWSQAELARHGFK----------HSAATVESMEAQLILVLS 234
            ER  PEQ++    +V  G W +  + +  FK               V++  A     +S
Sbjct: 179 PER--PEQLVDHNCLVYHGEWHEHSVWQ--FKKGDDYCEIGVSGNFRVDNAPALKSAAVS 234

Query: 235 GAYIGYLPEHYAQAWADKGDLRVLLPA-TFGYQAPFSMIMRRGRSREPLIQTFRDLLKTQ 293
           G  + YL  +  +   +KG L  LLP     +  P   +  R +   P +  F D +K  
Sbjct: 235 GLGVVYLASYLLENEIEKGTLVPLLPEWQLTHHLPLQAVYPRRKHLAPKVSAFIDFIKDH 294

Query: 294 L 294
           +
Sbjct: 295 I 295