Pairwise Alignments

Query, 747 a.a., (p)ppGpp synthetase from Pseudomonas simiae WCS417

Subject, 738 a.a., GTP diphosphokinase from Vibrio cholerae E7946 ATCC 55056

 Score =  673 bits (1736), Expect = 0.0
 Identities = 346/750 (46%), Positives = 494/750 (65%), Gaps = 21/750 (2%)

Query: 1   MVQVRAHQPINTDGSINLEAWLDHAISVDPALDREALKAACEFARESEQQDNASKNLWAE 60
           MV VR+   +N D    LE W+        +L +E   AA   A   + +   + N   +
Sbjct: 1   MVAVRSAH-LNPDQQFELETWI-------ASLTQEGKTAAKLTAVYRDCEQLLAGN--PQ 50

Query: 61  GTSSFRTGLEIAEILADLKLDQDSLIAAVLYRGVREGHIQLATVGQRFGSVVAKLIDGVL 120
           G      G E+ EIL  L +D+ +L+AA+L+     G +   ++ + +G  V KLI GV 
Sbjct: 51  GPLLLWRGREMIEILITLSMDRPTLVAALLFPIATSGVLDNESLEEGYGREVVKLIHGVE 110

Query: 121 RMAAISASLSPRQSMVLGTQGQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKTADDE 180
            MAAI                QV+N+R+ML+AMVDD R  +IKLAER C +R VK   DE
Sbjct: 111 EMAAIGQLNVTMHGSE--ASAQVDNVRRMLLAMVDDFRCVVIKLAERICNLREVKNEPDE 168

Query: 181 KRNRVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPDQYKQIATLLHERRLDRERFI 240
            R   A+E  +IYAPLA+RLGIG +KWE+ED +FRY +PD YKQIA  L ERR+ RE++I
Sbjct: 169 VRRVAAKECANIYAPLANRLGIGQLKWEIEDYAFRYQQPDTYKQIAKQLSERRIVREQYI 228

Query: 241 TDVMNQLRSELQATGVEADISGRAKHIYSIWRKMQRKGLAFSQIYDVRAVRVLVPEMRDC 300
            D ++ LR+E++ +G+ A++SGR KHIYSIWRKMQ+K LAF +++DVRAVR++  +++DC
Sbjct: 229 RDFVSDLRAEMKQSGINAEVSGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIIADKLQDC 288

Query: 301 YTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAVIGPEGKVLEVQIRTHAMHEEAEL 360
           Y ALGIVHT ++H+P EFDDY+ANPK NGY+S+HT ++GPEGK +E+QIRT  MHEE+EL
Sbjct: 289 YAALGIVHTKYKHLPNEFDDYVANPKPNGYQSIHTVILGPEGKTIEIQIRTKQMHEESEL 348

Query: 361 GVCAHWRYKGTDVKAGSNQYEEKISWLRQVLEWHEELGDIGGLAEQLRVDIEPDRVYIFT 420
           GV AHW+YK     A S  Y+EKI+WLR++L+W EE+ D G + ++LR  +  DRVY FT
Sbjct: 349 GVAAHWKYKEGSSAARSG-YDEKITWLRKLLDWQEEMSDSGEMLDELRSQVFDDRVYAFT 407

Query: 421 PDGHAIDLPKGATPLDFAYRVHTEIGHNCRGAKINGRIVPLNYSLQTGEQVEIITSKHGT 480
           P G  +DLP GATPLDFAY +H+E+GH C GAK+ GRIVP  + LQ G+QVEIIT+K   
Sbjct: 408 PKGDVVDLPMGATPLDFAYHIHSEVGHRCIGAKVAGRIVPFTHKLQMGDQVEIITAKEPN 467

Query: 481 PSRDWLNPNLGYITTSRARAKIVHWFKLQARDQNVAAGKTLLERELGRLGLPQVDFDKLA 540
           PSRDWLNP+LG++ + RARAKI  WF+ Q+R++N+ AG+ +LE EL ++G      +  A
Sbjct: 468 PSRDWLNPSLGFVHSGRARAKINAWFRKQSREKNLEAGREILEIELAKIGANLKHAEAYA 527

Query: 541 -EKANMKIAEDMFAALGAGDLRLAQLVNLAQQLVEPERGSEQLELIPRK------ATGYK 593
            ++ N+   ++M+  +G+GDLR+ Q+VN    LV      E+ +L   K       T  +
Sbjct: 528 LKRFNVNSVDEMYVGIGSGDLRINQIVNHINALVNKPTAEEEDKLALEKLQENKTLTPNR 587

Query: 594 PGKRGDIQIQGVGNLMTQIAGCCQPLPGDAIVGYITQGRGVSIHRQDCASVLQLGGREPE 653
           P K   + ++GV NLMT +A CCQP+PGD I GYITQGRG+S+HR DC  + +L    PE
Sbjct: 588 PHKDA-VVVEGVDNLMTHLARCCQPIPGDEIRGYITQGRGISVHRSDCEQLEELSLHAPE 646

Query: 654 RIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVSQVLLNERINVLAVNTRSNKEDNTALM 713
           RII   WG   V +Y + + + A +RSGLL+D++ +L NE++ V ++ +RS+ +    +M
Sbjct: 647 RIIDTVWGSGFVGSYLLTVRVEAMERSGLLKDITTLLANEKVKVASMKSRSDYKRQIIIM 706

Query: 714 SLTIEIPGLDALGRLLGRISQLPNIIETRR 743
              +E+  ++AL R+  RI Q+ +++  +R
Sbjct: 707 DFDLEVNNVEALARVSKRIEQIKDVMLVKR 736