Pairwise Alignments

Query, 1481 a.a., glutamate synthase from Pseudomonas simiae WCS417

Subject, 1530 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 1212 bits (3135), Expect = 0.0
 Identities = 664/1508 (44%), Positives = 943/1508 (62%), Gaps = 42/1508 (2%)

Query: 4    GLYQPDEFKDNCGFGLIAHMQGEPSHTLLQTAIEALTCMTHRGGINADGKTGDGCGLLIQ 63
            GLY P+   D CG G +AH++   SH ++  A++ L  M HRGG   D  +GDG G+L+Q
Sbjct: 26   GLYTPELEHDACGIGFVAHLKNRKSHQVVTQALDMLARMEHRGGQGCDPCSGDGAGILLQ 85

Query: 64   KPDQFLRAVAKEQFAVDLP--KQYAVGMVFFNQDPVKAEAARENMNREILAAGLQLVGWR 121
            KP +FL   A +   + LP  ++Y VG+V F +D  K    R+ + R      L ++G+R
Sbjct: 86   KPHEFLLEEAVK-LGIKLPSFEKYGVGVVLFPKDEHKRAQCRDILERNAKRLDLDVIGYR 144

Query: 122  KVPIDTSVLGRLANERLPQIEQVFIAG-EGLSDQDMAIKLFTSRRRS------SVANAAD 174
             +P + S+LG       PQ E VFI+G  G+   ++  KL+  R  +      SV+N  D
Sbjct: 145  VLPTNNSMLGADPLSTEPQFEHVFISGGPGMQPDELERKLYVLRNYTVRVCLESVSNIGD 204

Query: 175  TDHYICSFSHKTIIYKGLMMPADLTAFYPDLSDERLQTAICVFHQRFSTNTLPKWPLAQP 234
             D YI S S+KT++YKG +    +  ++ DL +  + TA+ + H RFSTNT PKW LAQP
Sbjct: 205  -DFYINSMSYKTLVYKGQLTTEQVPQYFLDLQNPTMVTALALVHSRFSTNTFPKWRLAQP 263

Query: 235  FRFLAHNGEINTITGNRNWAVARRTKFANDLM---DLEELGPLVNRVGSDSSSMDNMLEL 291
            FR++AHNGEINT+ GN NW  AR     + L    +++ L P+     SDS++ D +LEL
Sbjct: 264  FRYIAHNGEINTVRGNLNWMKAREAILQSKLFTQAEIDMLLPICQEGASDSANFDMVLEL 323

Query: 292  MVTGGIDLFRGVRMIIPPAWQNVETMDPDLRAFYEYNSMHMEPWDGPAGVVMTDGRYAVC 351
            +V  G  L   + M+IP AWQ  + MDP  RAFY+Y++  MEPWDGPA V  TDG     
Sbjct: 324  LVLSGRSLPHALMMMIPEAWQENKAMDPKRRAFYQYHANVMEPWDGPASVCFTDGVQVGA 383

Query: 352  LLDRNGLRPARWVTTTNGFITLASEIGVWNYKPEDVIAKGRVGPGQILAVDTETGQILDT 411
             LDRNGLRP+R+  T + F+ +ASE GV    P +V  +GR+ PG+I   D E G+I+  
Sbjct: 384  TLDRNGLRPSRYTVTKDDFLIMASESGVVEIDPANVEYRGRLQPGRIFVADLEQGRIISD 443

Query: 412  DAIDNRLKSRHPYKQWLRKNALRIQATMEDNDHGSAFYDVDQLKQYMKMYQVTFEERDQV 471
            + + + + S  PY++W+ +N L ++  + D D+  +    ++L    + + V+ EE + +
Sbjct: 444  EEVKDGIASAQPYEKWVEENLLSLKK-LPDADNVHSQPSPERLLHRQQAFGVSSEEVNDI 502

Query: 472  LRPLGEQGYEAVGSMGDDTPMAVLSQRVRTPYDYFRQQFAQVTNPPIDPLREAIVMSLEV 531
            +  L + GYE +GSMG D P+AVLS + +   +YF+Q FAQVTNPPIDP+RE +VMSL  
Sbjct: 503  ILTLAQTGYEPLGSMGADWPVAVLSHQSQHLSNYFKQLFAQVTNPPIDPIRERMVMSLNT 562

Query: 532  CLGAERNIFQESPEHASRVILSSPVVSPAKWRSLMTLERPGFDRQIIDLNY---DESLGL 588
             +G ++N+  E+P H  +V L SPV+S A+   +  ++      + +D+ +   DE   L
Sbjct: 563  YIGRDQNLLAETPAHCRKVELESPVISNAELEKIRAIDNEHLQAKTLDIVFRASDEPGKL 622

Query: 589  EAAVRNVADQAEEAVRAGRTQIVLTDRHIAPGKLPIHASLATGAVHHRLTEKGLRCDSNI 648
            E A++ +   AE+AV  G + I+LTDR +      I A LA GAVHH L  KGLR    I
Sbjct: 623  ERALKRICQYAEDAVIDGYSIILLTDRAVNSNHAAIPAMLAVGAVHHHLIRKGLRSKCGI 682

Query: 649  LVETATARDPHHFAVLIGFGASAVYPFLAYEVLGDLIRTGEVLGDLY--EVFKNYRKGIT 706
            +VET  AR+ HHFA L+G+GA+AV P+L  E + DL R  ++  D+   + F+NYRKG+ 
Sbjct: 683  VVETGDARETHHFATLLGYGANAVNPYLVVETIVDLKRQKKLDADVSVEKYFENYRKGVN 742

Query: 707  KGLLKILSKMGISTVTSYRGAQLFEAIGLSEEVCDLSFRGVPSRIKGARFVDIEAEQKAL 766
             GLLKI SKMGIST+ SY GAQ+FEA+G+S+ V D  F G  +RI+G    DI  E    
Sbjct: 743  GGLLKIFSKMGISTLQSYHGAQIFEALGISKAVVDKYFTGTITRIQGLTLDDIAKEVLVR 802

Query: 767  AAEAWSARK-PIQQ---GGLLKFVHGGEYHAYNPDVVSTLQAAVQQGDYAKFKEYTALVD 822
                +  R+ P+Q    GG+ ++   GE H +NP+ +  LQ + +  +Y +FK+Y A VD
Sbjct: 803  HRIGYPTREIPLQVLDVGGVYQWKQRGEQHLFNPETIHLLQESTRHKNYQQFKKYAAAVD 862

Query: 823  N---RPVSMIRDLFKVKTLDTPLTISEIEPLESILKRFDSAGISLGALSPEAHEALAEAM 879
            +   + V++   L  VK     + I E+EP+ESI+KRF +  +S G++S EAH  LA AM
Sbjct: 863  SQGDKAVTLRSQLDFVKNPAGSIPIEEVEPIESIVKRFATGAMSFGSISYEAHSTLAIAM 922

Query: 880  NRLGARSNSGEGGEDPARY-----GTIKSSKIKQVATGRFGVTPEYLVNAEVLQIKVAQG 934
            NRLGA+SNSGEGGEDP R+     G  + S IKQVA+GRFGVT  YL NA+ +QIK+AQG
Sbjct: 923  NRLGAKSNSGEGGEDPMRFELNANGDSERSAIKQVASGRFGVTSYYLTNADEIQIKMAQG 982

Query: 935  AKPGEGGQLPGGKVNGLIAKLRYAVPGVTLISPPPHHDIYSIEDLSQLIFDLKQVNPQAL 994
            AKPGEGGQLPG KV+  I   R++ PGV LISPPPHHDIYSIEDL+QLIFDLK  N +  
Sbjct: 983  AKPGEGGQLPGDKVDEWIGATRHSTPGVGLISPPPHHDIYSIEDLAQLIFDLKNANRKGR 1042

Query: 995  VSVKLVAEAGVGTIAAGVAKAYADLITISGYDGGTGASPLTSIKYAGAPWELGLAETHQT 1054
            V+VKLV+EAGVGTIA+GVAKA AD++ I+G+DGGTGASP++SI++ G PWELGLAETHQT
Sbjct: 1043 VNVKLVSEAGVGTIASGVAKAKADVVLIAGHDGGTGASPISSIRHTGLPWELGLAETHQT 1102

Query: 1055 LRGNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGTAPMIALGCKYLRICHLNNCAT 1114
            L  N LR ++ VQ DG +KT  D+  A +LGAE +G  TA ++  GC  +R CH N C  
Sbjct: 1103 LLKNGLRNRIVVQADGQMKTPRDIAIAVLLGAEEWGVATAALVVEGCIMMRKCHKNTCPV 1162

Query: 1115 GVATQNEKLRKDHYIGTVDMVVNFFTYVAEETREWLAKLGVRSLEELIGRTDLLDILEG- 1173
            G+ATQN+ LR + + G VD VV FF Y+A+  RE +A+LG R++ E++G+   L + +  
Sbjct: 1163 GIATQNKTLR-ERFAGRVDDVVTFFQYMAQGLREIMAELGFRTINEMVGQAHKLKVRDDI 1221

Query: 1174 QTAKQNHLDLTPLLGSDHIPADKPQFCQVDRNPPFDKGLLAEKMVEMASSSINDASGGEF 1233
               K  +LDL+P+L  +   ++   +CQ  +N   +  +L   ++++A+ ++      + 
Sbjct: 1222 GHWKYKNLDLSPILFIEQPRSEDGIYCQTQQNHQLE-SILDRTLIQLATPALERGEAVKA 1280

Query: 1234 ALDICNCDRSIGARISGEIARKHGNQGMAKAPITFRFKGTAGQSFGVWNAGGLHMYLEGD 1293
             L I N DRS G  +S EI + + +QG+ + P+  +F G+AGQSFG +   G++  +EGD
Sbjct: 1281 ELPIINTDRSTGTMLSNEICKVYKDQGLPQ-PMQVKFNGSAGQSFGAFLTKGVYFEVEGD 1339

Query: 1294 ANDYVGKGMTGGKLVIVPPQGSVYKTQDSAIIGNTCLYGATGGKLFAAGTAGERFAVRNS 1353
            ANDY GKG++GG LV+ P + +    +++ ++GN C YGAT G+ +  G AGERF VRNS
Sbjct: 1340 ANDYWGKGLSGGTLVLYPNRNATIVPEENIVVGNVCFYGATSGESYIRGLAGERFCVRNS 1399

Query: 1354 GAHTVVEGTGDHCCEYMTGGFVAVLGKTGYNFGSGMTGGFAYVLDQDNTFVDKVNHELVE 1413
            GA  VVEG GDH CEYMTGG   +LG TG NF +GM+GG AYV D+   F  K+N ELV+
Sbjct: 1400 GAKVVVEGIGDHGCEYMTGGVAVILGSTGRNFAAGMSGGVAYVWDKSGDFQSKLNAELVD 1459

Query: 1414 IQRISGEAMESYRNHLQHVLDEYVEETGSEWGRNLAENLDDYLRRFWLVKPKAANLKSLL 1473
            +  I  E     R  L+ +L ++V+ TGSE  +    N D  L     V P+  + K++L
Sbjct: 1460 LDPIEAED----RALLKEMLTKHVQFTGSEVAKAFLANFDASLATMVKVMPR--DYKAVL 1513

Query: 1474 SSIRANPQ 1481
               +A  Q
Sbjct: 1514 QKRKAQEQ 1521