Pairwise Alignments

Query, 357 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 90.9 bits (224), Expect = 5e-23
 Identities = 86/330 (26%), Positives = 156/330 (47%), Gaps = 28/330 (8%)

Query: 21  FLLHSILTPFLVALLLAYLFDPVVDRLEKAGLSRTWGVVAVFALFTLIITALVLVLVPML 80
           +L+   +   ++A +++ L  P+ D  EK   S         A F   +   V++++P+L
Sbjct: 27  WLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHN-----NLAAFLSCVVLTVIIVIPLL 81

Query: 81  ---AKQLFRLYELAPQMLDWLQHTAM------PWAQAKLGLADGFWKFDKVKAA-ISEHM 130
                 + +  + +  +  W+    +      PW    L LA+ +  F+++    I++ +
Sbjct: 82  FIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYLPFEEISPQQIAQRI 141

Query: 131 GQTTDIVGVVLSQATASSLA-LIGWLTNLVLIPVVAFYLLRDWDLMMAKIRSLLP--RDR 187
           GQ     G  L   +A  L     ++ +  L+  V F+LLRD D +++ IR +LP  R +
Sbjct: 142 GQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHDKIISAIRHILPLSRSQ 201

Query: 188 EERIVSLAEECHEVLGAFVRGQLLVMLALGIIYAAGLMAIGLELGLLIGLIAGLAAIVPY 247
           E+R++S   E   V  + V G  L  +A G+    G+   G   GL  G + G A+ +P 
Sbjct: 202 EDRLLS---EIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFP-GLFWGTMMGFASFIPV 257

Query: 248 MGF-VIGIGAALVAGLFQFGGDLYPM-LGIVAVFMVGQALEGMVLTPLLVGDRIGLHPVA 305
           +G  +I I A L   LF  G   + + L I +V +VG      +L P L+    G++ + 
Sbjct: 258 VGTALIWIPATLY--LFLTGDTTWAIFLAIWSVAVVGSI--DNLLRPFLMQGSAGMNTLM 313

Query: 306 VIFAILAGGELFGFTGILLALPVAAVIMVL 335
           + F++L G +LFG  G++    + A+ MVL
Sbjct: 314 IFFSLLGGIQLFGLIGLIYGPLIFAITMVL 343