Pairwise Alignments

Query, 357 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 321 a.a., AI-2E family transporter from Methanococcus maripaludis S2

 Score = 69.3 bits (168), Expect = 1e-16
 Identities = 73/326 (22%), Positives = 141/326 (43%), Gaps = 33/326 (10%)

Query: 21  FLLHSILTPFL----VALLLAYLFDPVVDRLEKAGLSRTWGVVAVFALFTLIITALVLVL 76
           F L  +L PF+    +A+ +AY+  P+ D L K    RT+G  A+  L  ++I +L+LV+
Sbjct: 6   FALIYMLWPFMGIIALAVAVAYMTKPLYDIL-KPKFGRTYG--AIICLLGIVIPSLLLVV 62

Query: 77  VPMLAKQLFRLYELAPQMLDWLQHTAMPWAQAKLG--LAD-GFWKFDKVKAAISEHMGQT 133
           +            +A  ++ +L    +     K+   L D G+ + D     +S+     
Sbjct: 63  L------------VAEDVVTFLLSLDIENIITKVTPILNDIGYLRVDGPD--VSKPFSDI 108

Query: 134 TDIVGVVLSQATASSLALIGWLTNLVLIPVVAFYLLRDWDLMMAKIRSLLPRDREERIVS 193
             +   +L+   +   ++   L  L+ +  + FY L+D D +       +P D++     
Sbjct: 109 WSVSKPLLNSFASQISSIPSLLMKLLFLSFMTFYFLKDGDKLTDSFLIYVPEDKKRNTAL 168

Query: 194 LAEECHEVLGAFVRGQLLVMLALGIIYAAGLMAIGLELGLLIGLIAGLAAIVPYMG---- 249
              E H+ L     G  +  + +GII   G   IG+   + +G ++G+  I+P +G    
Sbjct: 169 FLSEIHKALKTLFIGNAVTSVIVGIISIIGYWLIGIPNPITLGALSGILNILPVVGGWTI 228

Query: 250 FVIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLVGDRIGLHPVAVIFA 309
           +V      L+ G    G     +LG+  +  +  A +   + P ++     LHP  V+ A
Sbjct: 229 YVPLTVYYLLTGEIAKG----ILLGLFGIIFLSLAPD-FAIRPRVISKDGDLHPALVLIA 283

Query: 310 ILAGGELFGFTGILLALPVAAVIMVL 335
            L G  +FG  G+ +   + A +  +
Sbjct: 284 FLIGPLVFGIPGLAIGPIIVATVYAI 309