Pairwise Alignments

Query, 234 a.a., DNA replication initiation factor from Pseudomonas simiae WCS417

Subject, 233 a.a., Chromosomal replication initiator protein DnaA from Xanthomonas campestris pv. campestris strain 8004

 Score =  137 bits (345), Expect = 2e-37
 Identities = 87/229 (37%), Positives = 120/229 (52%), Gaps = 4/229 (1%)

Query: 5   QLPLGVRLRDDATFINYYPGANAAALGYVERLCEADAGWTESLIYLWGKHGVGRTHLLQA 64
           QLPL +R   D    +Y     AA  G + +L    AG     +YL G  G G+THL  +
Sbjct: 5   QLPLALRAPSDQRLDSYI----AAPDGLIAQLQAFAAGQLSDWLYLAGPSGTGKTHLALS 60

Query: 65  ACLRFEQMGEPAVYLPLAELMDRGIGIFDHLEQYELVCLDDLQAIAGKAEWEEALFHLFN 124
            C   EQ G  + YLPL     R     + LE   LV LD + +IAG+ E E ALF   N
Sbjct: 61  VCAAAEQAGRSSAYLPLQAAAGRLRDALEALEGRSLVALDGVDSIAGQCEDEVALFDFHN 120

Query: 125 RLRDSGRRLLIAASTSPRELPIKLADLKSRMTLALIFQMRPLSDEDKLRALQLRASRRGL 184
           R R +G  LL  A   P  L + L DL+SR++  +   +  L D  +   L+ RA RRGL
Sbjct: 121 RARAAGITLLYTARQMPDGLALVLPDLRSRLSQCVRISLPVLDDVARAAVLRDRAQRRGL 180

Query: 185 HLTDEVGHFILTRGTRSMSALFDLLEQLDQASLQAQRKLTIPFLKETLG 233
            L +    ++LT   R ++ L  LL++LD+ SL AQR++T+PFL+  LG
Sbjct: 181 ALDEAAIDWLLTHSERELAGLVALLDRLDRESLAAQRRVTVPFLRRVLG 229