Pairwise Alignments

Query, 234 a.a., DNA replication initiation factor from Pseudomonas simiae WCS417

Subject, 236 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  190 bits (482), Expect = 2e-53
 Identities = 102/231 (44%), Positives = 146/231 (63%), Gaps = 3/231 (1%)

Query: 3   PIQLPLGVRLRDDATFINYYPGANAAALGYVERLCEADAGWTESLIYLWGKHGVGRTHLL 62
           P+QL L V L DD TF +YYP A    L  +++L     G  E+ IY+WG    GRTHL+
Sbjct: 6   PLQLSLPVYLPDDETFNSYYPAAGNDEL--IQKLRANAEGHGEAAIYVWGPVKSGRTHLM 63

Query: 63  QAACLRFEQMGEPAVYLPLAELMDRGIGIFDHLEQYELVCLDDLQAIAGKAEWEEALFHL 122
            AAC    ++   + YLPL         + + LEQ +L+C+DD+  IAG   WEEA+F L
Sbjct: 64  HAACAHANELDRRSFYLPLGIHASISTALLEGLEQLDLICIDDVDDIAGHPVWEEAIFDL 123

Query: 123 FNRLRDSGR-RLLIAASTSPRELPIKLADLKSRMTLALIFQMRPLSDEDKLRALQLRASR 181
           +NR+ ++ R  L+++  ++P +    L DL SRM   L +Q++P++D++KL ALQ RA+ 
Sbjct: 124 YNRVAENKRCALVVSGRSAPADAGFLLPDLVSRMQWGLNYQLQPMADDEKLAALQRRAAM 183

Query: 182 RGLHLTDEVGHFILTRGTRSMSALFDLLEQLDQASLQAQRKLTIPFLKETL 232
           RGL L ++VG F+L R  R +  LFD+L++LD+ASL  QRKLTIPF KE L
Sbjct: 184 RGLQLPEDVGRFLLNRMARDLRTLFDVLDKLDKASLVHQRKLTIPFAKEML 234