Pairwise Alignments

Query, 302 a.a., cobalamin biosynthesis protein CobD from Pseudomonas simiae WCS417

Subject, 317 a.a., adenosylcobinamide-phosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  103 bits (257), Expect = 5e-27
 Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 8/294 (2%)

Query: 5   LLCVAAVALDALLGEPRRWHPLVAFGNFAGRIEQRFNTGGRGWRS--HGVTAWVIAVVPL 62
           L+   A+    LL  P   HP+  +  FA  +  + NT     ++   G  AW + + P 
Sbjct: 15  LVMWGALLFHLLLPIPHAAHPVTLWHKFAELLASKVNTPASYAQNLLSGALAWGLMIFPT 74

Query: 63  TLLATALS---WAPYIGWVLEILALYCALGMRSLGEHVIPVAQALRSDDLDEARRRVSYL 119
             L  AL    W P +    ++  L  +L  R        +AQAL  +D  +AR  +   
Sbjct: 75  MALLWALKPLVWQPQL---FDLALLLLSLDWRRQETLANQLAQALAKEDKPQARALLQPF 131

Query: 120 VSRQTSELDSTEVARAATESVLENGSDAVFAALFWFVLAGVPGVVLYRLSNTLDAMWGYR 179
           V+RQT+ L +  + +A  E+++      V   LFW+ + G  G  LYRL   L   W   
Sbjct: 132 VNRQTTTLSALGLGKAGVETLVMGFGRNVIGVLFWYGVLGGSGAFLYRLIAELARAWSPS 191

Query: 180 NERFERFGWAAAKIDDVLNYIPARLVALTYAVLGKTRLALKCWRTQGPTWDSPNAGPVMA 239
              F+ FG+ A +I  +L+++P RL +L   +  +     K    Q  +W  P    ++ 
Sbjct: 192 RTTFQPFGFTAVRILALLDWLPLRLFSLLIILGKQAGTIFKTVLEQSRSWPLPGPAWLLC 251

Query: 240 AGAGALGVELGGAAIYHGEVHQRPQLGEGPAADADSIDRGWQLVQRGVWLWLLI 293
           A    L + LGG AIY  +   R ++G   A  A  I +   L+   +++W+ +
Sbjct: 252 AVGNKLQLALGGPAIYGEQKSVRAKIGGRIAPAAIHIAQVQSLIAWRIFVWIAL 305