Pairwise Alignments

Query, 302 a.a., cobalamin biosynthesis protein CobD from Pseudomonas simiae WCS417

Subject, 336 a.a., Cobalamin biosynthesis protein CbiB (NCBI) from Rhodospirillum rubrum S1H

 Score =  167 bits (422), Expect = 4e-46
 Identities = 110/284 (38%), Positives = 147/284 (51%), Gaps = 18/284 (6%)

Query: 5   LLCVAAVALDALLGEPRRW-----HPLVAFGNFAGRIEQRFNTGGRG---WRSHGVTAWV 56
           +L + A+  DA LG          HP+V  G     +EQR N   R     +  GV   +
Sbjct: 17  VLVLLALVFDAYLGGMGPLFRLIPHPVVVMGGAIDALEQRLNRAERDDATRKRRGVFTVI 76

Query: 57  I---AVVPLTLLATALSWAPYIGWVLEILALYCALGMRSLGEHVIPVAQALRSDDLDEAR 113
           +   A + L +   AL+    +GWVLE+L     L  R L +HV  VA  L +  +D  R
Sbjct: 77  VLVGAAIGLGVALQALASVLAVGWVLELLLAVALLAQRELHDHVAAVADGLETGGIDAGR 136

Query: 114 RRVSYLVSRQTSELDSTEVARAATESVLENGSDAVFAALFWFVLAGVPGVVLYRLSNTLD 173
             VS++V R  + LD   V R A ES+ EN SD V A +FWFVL G+PG++ Y++ NT+D
Sbjct: 137 EAVSHIVGRDPALLDHAGVGRGALESLAENFSDGVVAPVFWFVLFGLPGLLAYKMINTMD 196

Query: 174 AMWGYRNERFERFGWAAAKIDDVLNYIPARL--VALTYAVLGK----TRLALKCWRTQGP 227
           +M G+R  R   FGWAAA++DD +N IPARL  + L  A L K     R A         
Sbjct: 197 SMIGHRTPRLRAFGWAAARLDDGVNLIPARLSGLLLIAAALTKPWADARAAFVVMLRDAG 256

Query: 228 TWDSPNAGPVMAAGAGALGVELGGAAIYHGEV-HQRPQLGEGPA 270
              SPNAG    A AGALG+ L G  +Y GE     P +G+G A
Sbjct: 257 KHRSPNAGWPEGAMAGALGLRLSGPRVYKGEAPRDEPYVGDGRA 300