Pairwise Alignments

Query, 429 a.a., Long-chain fatty acid transport protein from Pseudomonas simiae WCS417

Subject, 428 a.a., membrane protein involved in aromatic hydrocarbon degradation (RefSeq) from Shewanella sp. ANA-3

 Score =  186 bits (471), Expect = 2e-51
 Identities = 131/433 (30%), Positives = 209/433 (48%), Gaps = 20/433 (4%)

Query: 7   KTTLSLAVAMASSHIFASGFALNEQDVAGMGTGFAGRSSSAENASTVYGNPAGMARLEGQ 66
           KT L++AVA+ASS  FASGF LN Q   GMG  FAG +  A+NAS +  NPA MA  +  
Sbjct: 6   KTLLAVAVALASSQTFASGFQLNSQSATGMGRAFAGDAVIADNASVLSRNPAAMALFDKD 65

Query: 67  QVTGGVAAIDASSNIKDVSGRSSGTNKG---DMVPFTAVPFGFYTNKLNDQWAVGFGVYA 123
            ++ G+   D + ++KDV+      + G   D      +P  FY + ++D++AVGF  ++
Sbjct: 66  AISLGLTYADITVDVKDVNFGGGAYDLGSIDDAGSSKVIPNIFYIHPIDDKFAVGFAAFS 125

Query: 124 PFGLVTDYESGFQGKAFG-----SKSEVTVITFQPTVSYAFNDRVSIGFGPTINRIAGTL 178
            FG  TD  S  + K         ++EVT + F  +VSY  ND  SIG G  ++ + G  
Sbjct: 126 NFGTGTDASSLSKNKPAAPFDLLGETEVTTVNFNASVSYRINDMFSIGAG--LDAVYGEG 183

Query: 179 ESDINLPVAGTGSNNIKIKGDDTAVGFNAGLLVQATDTTRVGLTYHSKVKYKLEGHTEVT 238
               N+   GT +  + +  D  A G   G  V+     R G++Y       +EG     
Sbjct: 184 RLTRNM---GT-TPLVDVDADGWAFGGIVGATVELNKDNRFGISYRFSPTVNVEGDINTV 239

Query: 239 KGTNVP--ASLLNNGRYDASLKIDTPESWDLSVTQDMSDAWKLYAGATWTRWSRLKDITV 296
             T +P   ++     +D SL +   + + ++    ++  + L+  A  T+W     IT 
Sbjct: 240 SMTTIPGVGAVPVTTSFD-SLDVPLADIFQVAGFHQITPKFALHYTAQHTQWGNFDQITA 298

Query: 297 NNEGVSAAAGSGVLAPQIVGTIKEDQNWHDTWAYAVGTSYRVTKQVVLRTGLTFDQSPTN 356
             +G +  A  GV  P     +KE Q W D+W ++VG +Y + +Q  +R G   DQ   +
Sbjct: 299 -KDGTATIAAVGVTQPVGDVALKEYQ-WKDSWLFSVGGTYTINEQFTVRAGYMHDQGVVD 356

Query: 357 NTDRSPRIPTGDRTIFSLGLGYDVMPNMTVDLAYSYLKEEPVKVARANALGQSYNAKYEN 416
               S   P  DR  ++ G+ Y + P  TVDL  +Y+K E V +   +A+    NA  E+
Sbjct: 357 EIS-SISFPDSDRNWYTAGMSYHINPQNTVDLGIAYIKGEEVHLIENSAITGPVNAVTES 415

Query: 417 SANGFGLGVTYKF 429
               + +  +Y+F
Sbjct: 416 KGMYYSVQYSYQF 428