Pairwise Alignments

Query, 492 a.a., recombinase RmuC from Pseudomonas simiae WCS417

Subject, 521 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  345 bits (885), Expect = 2e-99
 Identities = 181/467 (38%), Positives = 303/467 (64%), Gaps = 17/467 (3%)

Query: 30  LNARMTG--WELLEERLATAQLAQEGLAAQLDASRDEISDLSQANAAKQADLAAVRREVE 87
           LN R+T   W+  ++ L   ++ Q    A+L  ++ ++    + N  +Q      R E +
Sbjct: 29  LNQRLTRSRWQQFKDELEQ-EMRQVNEDAELSLAQQQVLVDDKDNQLRQCQQ---RLEQK 84

Query: 88  LLQIDRDNARDAAHAWNLDRSAKETELRRLD---------ALSAALRAELREQQDSHQQR 138
           + Q+ +  A  A    ++++   ++  R+L+         A+   ++A+   QQ + Q++
Sbjct: 85  IEQLGKAEAM-AERLPSIEQQLADSHRRQLELQLALSKSNAMQQTIQAKADAQQSAMQEK 143

Query: 139 LTDLQGSRDELRAQFAELAGKIFDEREQRFAETSQERLGQLLDPLKERIQSFEKRVEESY 198
           +  L+ +   L+ QF  LA +IF+ER + F   +  +L  +L PLK++++ F +++ ESY
Sbjct: 144 IATLEMAEVRLQTQFENLANRIFEERSESFKHQNANQLEGVLGPLKQQLEGFRQQIRESY 203

Query: 199 QNEARERFSLAKELERLQQLNLRLSDEATNLTRALKGQ-KTQGNWGELILERVLEHAGLE 257
            +E  ER +L  +LE L++LNL++S +A NLT+ALKG  K QGNWGE+IL+RVL+ +GL 
Sbjct: 204 NHEQSERSALKHQLEHLRELNLKMSQDAINLTKALKGDNKQQGNWGEVILDRVLQESGLR 263

Query: 258 KGREYQTQVSLKGPDGERFQPDVLIMLPGDKQVVVDSKVSLTAYQQYVAAEDDVIGQAAL 317
           +G EY TQ  LK   G+RF+PDV++ LP +K VV+D+K+SL +Y++Y  +ED ++ + A+
Sbjct: 264 EGHEYHTQQDLKDDSGKRFKPDVIVHLPENKDVVIDAKMSLISYERYFNSEDPLVREQAI 323

Query: 318 KQHVLSLRNHVKGLAGKDYKRLEGLHSLDFVLLFVPIEAAFSAALQAEPNLFQEAFDRHI 377
            +HVLS+RNH+KGL+ KDY+RL GL SLD+VL+F+PIE AF  AL+ +P+L   A +++I
Sbjct: 324 NEHVLSIRNHIKGLSQKDYQRLHGLKSLDYVLMFIPIEPAFLLALEHDPSLVNFALEQNI 383

Query: 378 VIVSPTTLLATLRVIDSLWKQERQSQNAREIAERAGWLYDKFVLFIQDLDEVGNRLQQLD 437
           ++VSPT LL  LR I+++W+ E Q+Q+A+ IA++AG +YDK   ++ D++++G  L   +
Sbjct: 384 MLVSPTNLLVALRTINNIWRYEYQNQHAQTIAKQAGRIYDKLCGYLDDMEKLGRALDNAE 443

Query: 438 KAYSAARNKLTDGRGNLVSRTEQLRLLGARASKSLPADLLERAMTDS 484
           K Y +A NKL+ G+GNLV +   ++ LG   SK L   LLE+A+ ++
Sbjct: 444 KTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDKMLLEKALNEA 490