Pairwise Alignments

Query, 1156 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1155 a.a., Na+/proline symporter from Pseudomonas stutzeri RCH2

 Score = 1779 bits (4609), Expect = 0.0
 Identities = 890/1158 (76%), Positives = 1009/1158 (87%), Gaps = 6/1158 (0%)

Query: 1    MTLSSGLIATVALAYMAIMFAIAFYGDRRRAPLPPRMRAWVYSLSLAVYCTSWTFFGAVG 60
            M LS GLIA VAL YMAI+FAIAFYGDR R  + PR+R WVYSLSLAVYCTSWTFFGAVG
Sbjct: 1    MKLSGGLIAAVALVYMAILFAIAFYGDRNRDSMSPRLRPWVYSLSLAVYCTSWTFFGAVG 60

Query: 61   QAAEQLWAFLPIYLGPVLLLVLAPWVLQKMILISKQENITSIADFIAARYGKSQSLAVVV 120
            Q+ EQLWAFLPIYLGP+LL++ AP V+QKMI+ISKQENITSIADFIAARYGKSQ LAVVV
Sbjct: 61   QSTEQLWAFLPIYLGPILLMLFAPHVIQKMIMISKQENITSIADFIAARYGKSQVLAVVV 120

Query: 121  ALICLVGVLPYIALQLKGIVLGVNLLIGAGADTTGTRAQDTALIVSLVLALFTIVFGTRN 180
             LICLVGVLPYIALQLKGIVLGVN+L G   +  GT  +DTALIVS+VLALFTI+FGTRN
Sbjct: 121  TLICLVGVLPYIALQLKGIVLGVNVLSGINVEAAGTGTRDTALIVSIVLALFTILFGTRN 180

Query: 181  LDATEHHRGMVLAIAFESLVKLLAFLAVGAFVTYGLYDGFGDLFSQAMLAPRLDEYWKET 240
            LD TEHHRGMVLAIAFESLVKLLAFLAVGAFVT+GLY+GFGDLF++A  AP L ++W E 
Sbjct: 181  LDVTEHHRGMVLAIAFESLVKLLAFLAVGAFVTFGLYNGFGDLFNRAHDAPELADFWSEN 240

Query: 241  VNWPSMVVQTGVAMMAIICLPRQFHVTVVENIDPQDLRLAKWVFPAYLVLAALFVIPIAL 300
            VNW +M+VQT VAMMAI+CLPRQFHV+VVENI+P+D RLA+WVFP YLVLAA+FV+PIAL
Sbjct: 241  VNWAAMLVQTTVAMMAIVCLPRQFHVSVVENIEPRDFRLARWVFPLYLVLAAVFVVPIAL 300

Query: 301  GGKMLLPSSVLPDSYVISLPMAEAHPALAVLAFIGGASAATGMVIVASIALSTMVSNDML 360
             G+MLLP+ V PDS+VISLP+AE HP LA+LAFIGGASAATGMVIVAS+ALSTMVSNDML
Sbjct: 301  AGQMLLPAGVTPDSFVISLPLAELHPWLALLAFIGGASAATGMVIVASVALSTMVSNDML 360

Query: 361  LPWLLRRSSAERPFEVFRHWMLSVRRVSIVIILLLAYVSYRLLGSTASLATIGQIAFAAV 420
            LPWLLRR  AERPFE FRHWMLSVRR++IV ILLLAYVSYRLLGSTASLATIGQIAFAA+
Sbjct: 361  LPWLLRRQEAERPFEAFRHWMLSVRRITIVAILLLAYVSYRLLGSTASLATIGQIAFAAI 420

Query: 421  TQLAPAMLGALYWKQANRRGVFAGLAAGTFLWFYTLVLPVTAKSLGWSLSLFPGLTWMHS 480
            TQLAPAM+GALYWKQANRRGVFAGL AG  +WFYTL+LP+    LGW L +FPGL+WM++
Sbjct: 421  TQLAPAMVGALYWKQANRRGVFAGLTAGAAIWFYTLILPL----LGWPLDMFPGLSWMYN 476

Query: 481  HPLGLSVTSLTLGTVFSLAGNFTLFVWVSMLSRTRVSEHWQAGRFIGQEISQRASARSML 540
              LG  ++ LTLG   SL GN TLF WVS+L++T V+EHWQA RFIGQEI+    AR +L
Sbjct: 477  GGLGFGLSGLTLGVTLSLIGNATLFFWVSILTQTHVAEHWQASRFIGQEITSPTGARRLL 536

Query: 541  SVQISDLLSLAARFVGEERAQQSFIRFAYRQGKGFNPNQNADNDWIAHTERLLAGVLGAS 600
            +V++ DLL+LA+RFVG ERA+QSF RFA R G+ F P   AD  WIAHTERLLAGVLGAS
Sbjct: 537  AVRVEDLLTLASRFVGAERAEQSFQRFARRHGQDFTPKLQADGQWIAHTERLLAGVLGAS 596

Query: 601  STRAVVKAAIEGREMQLEDVVRIADEASEVLQFNRALLQGAIENITQGISVVDQSLKLVA 660
            STRAVVKAA+EGR+MQ++DVVRI  EASEVLQFNRALLQGAIENITQGISVVDQSL+LVA
Sbjct: 597  STRAVVKAALEGRDMQVDDVVRIVGEASEVLQFNRALLQGAIENITQGISVVDQSLRLVA 656

Query: 661  WNRRYLELFNYPDGLISVGRPIADIIRYNAERGLCGPGEAEVHVARRLHWMRQGRAHTSE 720
            WN RYLELF YPDGL+ +GRPIADIIRYNAERGLCGPG+ + HVA+RL+WMRQGRAHTSE
Sbjct: 657  WNHRYLELFEYPDGLVYIGRPIADIIRYNAERGLCGPGDPDTHVAKRLYWMRQGRAHTSE 716

Query: 721  RLFPNGRVIELIGNPMPGGGFVMSFTDITAFREAEQALTEANEGLEQRVTARTYELSQLN 780
            RLFPNGRV+ELIGNPMPGGGFVMSF+DITA+REAE+AL +ANEGLEQRV+ RT ELSQLN
Sbjct: 717  RLFPNGRVVELIGNPMPGGGFVMSFSDITAYREAERALKDANEGLEQRVSERTQELSQLN 776

Query: 781  VALTDAKGVAESASQSKTRFLAAVSHDLMQPLNAARLFSAALSHQNDGLSSEARQLVQHL 840
             AL +AK  AE+A+QSKTRFLAAVSHDLMQPLNAARLFSAALSHQ   L  EA++LVQHL
Sbjct: 777  QALIEAKSTAEAANQSKTRFLAAVSHDLMQPLNAARLFSAALSHQQSALPREAQELVQHL 836

Query: 841  DSSLRSAEDLISDLLDISRLENGKINPQRQPFVLNELFDTLGAEFKALAQEQGLRFRLRG 900
            DSSLRSAEDLI+DLLDISRLE+G++ P R PF L  LFDTLG EF  LA+EQG+ FR+ G
Sbjct: 837  DSSLRSAEDLITDLLDISRLESGRVTPDRNPFPLATLFDTLGTEFTVLAREQGVNFRVHG 896

Query: 901  SRLRVDSDIKLLRRILQNFLTNAFRYADGPVLLGVRRRKGELCLEVWDRGPGIPLDKQKV 960
            S+LRVDSDI+LLRR+LQNFLTNAFRYA G V+LGVRR+   L LEVWDRGPGIP DK KV
Sbjct: 897  SKLRVDSDIRLLRRVLQNFLTNAFRYAKGRVVLGVRRQGASLRLEVWDRGPGIPQDKLKV 956

Query: 961  IFEEFKRLDSHQTRAEKGLGLGLAIADGLCRVLGHRLSVRSWPGKGSVFSVRVPLAR--N 1018
            IFEEFKRLDSHQTRAEKGLGLGLAIADGLC VL H L VRSWPGKGSVFSV VP+AR  +
Sbjct: 957  IFEEFKRLDSHQTRAEKGLGLGLAIADGLCHVLEHPLEVRSWPGKGSVFSVTVPIARALS 1016

Query: 1019 QVSAPIKPPQENGLPLSGAQVLCVDNEESILIGMRSLLTRWGCEVWTATDQAQCAALLAD 1078
            Q    +K  +     L+G QVLC+DNE+SIL+GM SLLTRWGC+VWTA+++ +C ALLA+
Sbjct: 1017 QPRPVVKRGEPQHSALTGTQVLCIDNEDSILVGMSSLLTRWGCQVWTASNRDECEALLAE 1076

Query: 1079 GVRPQLALVDYHLDHGETGTELMGWLRAQLAEPIPGVVISADGRPEMVAEVHAAGLDYLA 1138
             +RPQL LVDYHLD G+TGTELM WLR +L EP+PGVVISADGRPE++A +HA+GLD+LA
Sbjct: 1077 DIRPQLVLVDYHLDEGQTGTELMAWLRTRLGEPVPGVVISADGRPELIAAIHASGLDFLA 1136

Query: 1139 KPVKPAALRALLSRHLPL 1156
            KPVKPAALRAL+SRHL L
Sbjct: 1137 KPVKPAALRALMSRHLTL 1154