Pairwise Alignments

Query, 127 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 122 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 87.0 bits (214), Expect = 8e-23
 Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 4/121 (3%)

Query: 6   LLLRYGL-LAIGWLSVALGVIGIFLPVLPTTPFLLLAAACFARSSPRFYHWLVQHPRLGP 64
           ++L+ GL L IG L++ LG+IGI +P+LPT PF+LLAA CFARSS R + WL+ HP    
Sbjct: 1   MILKRGLFLFIGCLALGLGLIGIVVPLLPTVPFILLAAYCFARSSERLHQWLMTHPWFAD 60

Query: 65  WIRDYLDGNGIPLKGKVYAIGLMWLSISVSCYLVPLPWARGFMLTSAVLVTIYILRQKTL 124
            +  +     +    K  A+ L  LS SVS  +VP+ W +  +LT A+ +  Y+   KT+
Sbjct: 61  ALTQWQTHRAMRPGLKRRAMLLSGLSFSVSILVVPIVWVKLLLLTMAIGLLWYL---KTI 117

Query: 125 P 125
           P
Sbjct: 118 P 118