Pairwise Alignments

Query, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

Subject, 609 a.a., DNA helicase RecQ from Rhodanobacter denitrificans FW104-10B01

 Score =  701 bits (1809), Expect = 0.0
 Identities = 347/609 (56%), Positives = 445/609 (73%), Gaps = 10/609 (1%)

Query: 1   MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLA 60
           M   A  +L+ +FGY SFRG+Q A++E +  GGDALVLMPTGGGKSLC+Q+PALLR G  
Sbjct: 1   MNASALELLQSVFGYPSFRGQQQAVVEHLGEGGDALVLMPTGGGKSLCYQIPALLRQGTG 60

Query: 61  VVVSPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQ 120
           +VVSPLIALM DQV  L E GVAAA LNS+L AE QR++  ++  GE+ +LY+APERL+ 
Sbjct: 61  IVVSPLIALMQDQVDALREAGVAAAYLNSSLGAEAQREVERQLLAGELNLLYVAPERLLT 120

Query: 121 PRMLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRT 180
            R L  L+S+E+ALFAIDEAHCVSQWGHDFR EY +L  L + FP  PRIALTATAD RT
Sbjct: 121 SRFLGLLESIEVALFAIDEAHCVSQWGHDFRPEYRELAILHQRFPHAPRIALTATADPRT 180

Query: 181 REEIVERLHLQNAERFLSSFDRSNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKK 240
           REEIVERL LQ+A +F+SSFDR NI YR+  +   ++QL  FL   + ++GIVYCLSR+K
Sbjct: 181 REEIVERLSLQHARQFVSSFDRPNIGYRVGLRHNAKRQLTEFLQGHQGESGIVYCLSRRK 240

Query: 241 VDEVAAFLCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFV 300
           VD+ AA+L E G  ALPYHAGL    RA +Q+RFL E+G++MVAT+AFGMGIDK +VRFV
Sbjct: 241 VDDTAAWLAESGVEALPYHAGLDAATRAKNQQRFLREDGVVMVATVAFGMGIDKPDVRFV 300

Query: 301 AHMDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHK 360
           AH+DLP+S+E YYQETGRAGRDGLPA+AWM+YGL DVV + QM+  SE  +  KR+E+ K
Sbjct: 301 AHLDLPRSIEGYYQETGRAGRDGLPAEAWMIYGLSDVVTMSQMIAQSESADERKRVERQK 360

Query: 361 LDAMLSLCEETRCRRQTLLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQGLSAIYRTG 420
           L+++L+  E T CRRQ LL  F E  P PCGHCDNC+   +TWDAT PA++ LSA+YRTG
Sbjct: 361 LESLLAYAEATGCRRQLLLGAFGEVYPGPCGHCDNCLAPPKTWDATVPAQKALSAVYRTG 420

Query: 421 QRYGVGHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIE 480
           QRYG GH++DVL G++ E+VR+  H +LS +GVG    E +WRS+FRQ++A GL++ D E
Sbjct: 421 QRYGSGHVIDVLRGEETERVRALDHHRLSTFGVGADLDEKQWRSVFRQLLAAGLLEADAE 480

Query: 481 GFGGLRLNDSCRPLLKGEVSLELRRDLKPQTTAK----------SSTSQASQLVRGEERE 530
           G+G LRL  + R +L G   L+LR D +P+  ++             S  S  +   E+E
Sbjct: 481 GYGTLRLTAASRSVLSGGRQLKLREDARPERASRRRRDSKLVTSDKGSGGSLGIEAYEQE 540

Query: 531 QWEALRTLRRKLAQEHSVPPYVIFPDSTLLEMLREQPTSMAEMARVSGVGARKLERYGQA 590
            W+ALR LR +LA++  VPPYV+F D+TLL MLR  P +  E+A +SGVG  KL+RYG  
Sbjct: 541 LWDALRALRTQLAKQQGVPPYVVFHDATLLAMLRAMPANEDELATISGVGEAKLKRYGSD 600

Query: 591 FLEVLGGQA 599
           FL V+   A
Sbjct: 601 FLAVINAPA 609