Pairwise Alignments

Query, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

Subject, 636 a.a., ATP-dependent DNA helicase from Sinorhizobium meliloti 1021

 Score =  626 bits (1615), Expect = 0.0
 Identities = 311/593 (52%), Positives = 411/593 (69%), Gaps = 6/593 (1%)

Query: 8   VLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVSPLI 67
           +LK I+GY +FRG+Q A+++ V +GGDA+VL PTG GKSLCFQ+PAL R G+ +VVSPLI
Sbjct: 40  LLKRIYGYSTFRGQQQAVVDHVVAGGDAVVLFPTGAGKSLCFQIPALCRRGVGIVVSPLI 99

Query: 68  ALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQPRMLAFL 127
           ALM DQV  L++LG+ AA+LNS+L+ ++   +   + R E+ +LY+ PER V       +
Sbjct: 100 ALMRDQVEALKQLGIRAAALNSSLTRDEAIAVRRALSRDELDLLYVTPERAVTDGFAEMI 159

Query: 128 QSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREEIVER 187
              +IALFAIDEAHCVSQWGHDFR EY  LG LAE FP VPRIALTATAD  TR++++ER
Sbjct: 160 ADADIALFAIDEAHCVSQWGHDFRPEYRGLGCLAERFPGVPRIALTATADPHTRDDMIER 219

Query: 188 LHLQNAERFLSSFDRSNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKKVDEVAAF 247
           L L  A  F SSFDR NI Y IV ++QPR+QLL FLS  +  +GIVYCLSR KV++ A +
Sbjct: 220 LGLGGARVFASSFDRPNIAYEIVERDQPRQQLLRFLSRFKDASGIVYCLSRAKVEDTAEW 279

Query: 248 LCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFVAHMDLPK 307
           L  QG  ALPYHAG+    R  HQ  FL EE L +VAT+AFGMGIDK +VR+VAH+DLP 
Sbjct: 280 LDAQGIRALPYHAGMERAARDAHQDAFLKEENLCLVATVAFGMGIDKPDVRYVAHLDLPG 339

Query: 308 SLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHKLDAMLSL 367
           S+EAYYQETGRAGRDGLP++ WM YG+ DV+  ++M+      E  KR+E+ KL+++L++
Sbjct: 340 SVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRRRMIDEGGAPEEIKRIERAKLNSLLAI 399

Query: 368 CEETRCRRQTLLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQGLSAIYRTGQRYGVGH 427
           CE   CRRQ +LA+F E  P  CGHCD C+  V+TWD TE A + L+A+YRTG+R+G GH
Sbjct: 400 CETAGCRRQAILAHFGEAHPGGCGHCDTCLKPVETWDGTEAAIKALAAVYRTGERFGTGH 459

Query: 428 LVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIEGFGGLRL 487
           L+DVL G  NEK   FGH  + V+G GK      W+S+FRQ++A GL+ +D   FG L+L
Sbjct: 460 LIDVLTGSVNEKTERFGHVDMPVFGAGKDLPARTWQSIFRQLLAAGLISVDHAAFGALKL 519

Query: 488 NDSCRPLLKGEVSLELRRDLKPQTTAKSS-----TSQASQLVRGEEREQWEALRTLRRKL 542
               R + + E  +  R+D      AK++      S+ S L  G + E +E LR+ R  L
Sbjct: 520 EPEARSVFRRERQVLFRKDRPSSGKAKTARGSKPASERSDLA-GSDLELFERLRSERLSL 578

Query: 543 AQEHSVPPYVIFPDSTLLEMLREQPTSMAEMARVSGVGARKLERYGQAFLEVL 595
           A+E  VPPYV+FPD+TL+ + + +P    E+  V G+G  K ERYG+AFL V+
Sbjct: 579 AREMDVPPYVVFPDTTLIALAKRRPRDFEELLDVPGIGESKRERYGEAFLAVI 631