Pairwise Alignments

Query, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

Subject, 629 a.a., ATP-dependent DNA helicase RecQ (NCBI) from Rhodospirillum rubrum S1H

 Score =  547 bits (1410), Expect = e-160
 Identities = 276/600 (46%), Positives = 399/600 (66%), Gaps = 9/600 (1%)

Query: 3   EQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVV 62
           + A+ +L DI+G+  FR  Q AII  V  G D L +MPTG GKSLC+Q+PAL+R G+ +V
Sbjct: 29  DPARVLLADIWGFKDFRPGQEAIIRAVLGGEDVLAVMPTGSGKSLCYQLPALMRQGVTLV 88

Query: 63  VSPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQPR 122
           VSPLIALM DQVA L+ LGVAA +LNS++  +  R +   ++ G +K+LY+APERL +P 
Sbjct: 89  VSPLIALMRDQVAQLDALGVAAGALNSSIDMDGYRRVMDGLRGGRLKLLYVAPERLARPD 148

Query: 123 MLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTRE 182
            L+ L+   +   AIDEAHCVSQWGHDFR +YL LG++ E    V  +A TATAD  TR+
Sbjct: 149 TLSLLRDSGVTALAIDEAHCVSQWGHDFRPDYLCLGKVREDLGGVQTVAFTATADAATRD 208

Query: 183 EIVERLHLQNAERFLSSFDRSNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKKVD 242
           +I  RL       F+  FDR N+   + PK   R+++  F++    ++G++YC SR + +
Sbjct: 209 DIAGRLFPAPPRLFIGGFDRPNLRLAMRPKGDTRRRMFEFVAAHTGESGVIYCGSRARTE 268

Query: 243 EVAAFLCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFVAH 302
           E+A  L   G+ ALPYHAGL   +R  +Q  FL E+GL+MVAT+AFGMGIDK +VRFV H
Sbjct: 269 ELAEGLRGAGHRALPYHAGLDKPVRDANQDAFLAEDGLVMVATVAFGMGIDKPDVRFVCH 328

Query: 303 MDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHKLD 362
            D+P+S+EAYYQE GRAGRDGL AD    YGL DV + +  ++ S+  +  KR+E  +L+
Sbjct: 329 ADMPRSIEAYYQEIGRAGRDGLAADTLTFYGLDDVRLHRMRIEESQAGDEQKRVEIQRLN 388

Query: 363 AMLSLCEETRCRRQTLLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQGLSAIYRTGQR 422
           A+L+LCE  RCRRQTLL YF E   EPCG+CD C++GV+++D T  A++ +SA+ RTGQR
Sbjct: 389 ALLALCEAPRCRRQTLLGYFGE-RTEPCGNCDLCINGVESFDGTIEAQKAMSAMLRTGQR 447

Query: 423 YGVGHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIEGF 482
           +   HL+++L+G   + +  +GH+KL  +GVGK      WRS+FRQ+ A GL+ +DI   
Sbjct: 448 FATEHLINILVGTQTDAITQYGHDKLPTFGVGKDHTRNVWRSIFRQISAGGLISLDIANH 507

Query: 483 GGLRLNDSCRPLLKGEVSLELRRDL-------KPQTTAKSSTSQASQLVRGEEREQWEAL 535
           G   + ++ R +L+G+  + LR D+       + +   + +++ A QL   ++R  ++AL
Sbjct: 508 GRWLMTEAGRAVLRGQAGVALRSDVLEAAGRGERKDKERRASAPAVQL-EADDRALFDAL 566

Query: 536 RTLRRKLAQEHSVPPYVIFPDSTLLEMLREQPTSMAEMARVSGVGARKLERYGQAFLEVL 595
           R  R++LA+  +VP YV+F D TL+E+  ++P S+  M  + G+G  KL RYG AFLEV+
Sbjct: 567 RAKRQELARAENVPAYVVFADRTLIELATKRPPSLDAMREIHGIGQSKLARYGAAFLEVI 626