Pairwise Alignments

Query, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

Subject, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

 Score = 66.6 bits (161), Expect = 3e-15
 Identities = 70/308 (22%), Positives = 128/308 (41%), Gaps = 45/308 (14%)

Query: 41  TGGGKSLCFQVPAL------LRNGLAVVVSPLIALMDDQVATLEELGVAAASLNSTLSAE 94
           TG GK+  F +P L       RN  A++++P   L       ++ +  +       +   
Sbjct: 49  TGTGKTAAFGIPILETIDEHSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGG 108

Query: 95  QQRDLAARIKRGEVKMLYLAPERLVQPRMLAFLQSLEIALFAIDEAHCVSQWGHDFRREY 154
           Q  D   R  R  V+++   P R++       ++   ++   +DEA            E 
Sbjct: 109 QSIDRQIRELRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEAD-----------EM 157

Query: 155 LQLGQLAELFPDVPRIALTATADKR------TREEIVERLHLQNAERFLSSFDRSNI--- 205
           L +G       DV  I  + + DKR      T  + + +L    A+ ++  +D   +   
Sbjct: 158 LNMG----FIDDVEEILKSVSTDKRMLLFSATLPDSIMKL----AKNYMREYDIIKVKRQ 209

Query: 206 ----------FYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKKVDEVAAFLCEQGYPA 255
                     FY I  +++  + L   +   +   G+++C ++  VDEVA  L E+GY A
Sbjct: 210 QLTTTLTDQSFYEIHSRDK-FELLSRIIDTEKEFYGLIFCKTKADVDEVANRLNEKGYAA 268

Query: 256 LPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFVAHMDLPKSLEAYYQE 315
              H  +    R     +F  ++  ++VAT     GID +++  V + D+P++ E+Y   
Sbjct: 269 EGLHGDMTQAQREKTLDKFKGKKINVLVATDVAARGIDINDLTHVVNFDIPQNPESYVHR 328

Query: 316 TGRAGRDG 323
            GR GR G
Sbjct: 329 IGRTGRAG 336