Pairwise Alignments

Query, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

Subject, 615 a.a., ATP-dependent DNA helicase RecQ from Burkholderia phytofirmans PsJN

 Score =  656 bits (1693), Expect = 0.0
 Identities = 333/607 (54%), Positives = 431/607 (71%), Gaps = 20/607 (3%)

Query: 8   VLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRN----GLAVVV 63
           +L ++FGY +FRG+QG I+E VA GGD LVLMPTGGGKSLC+Q+P+L+R     G  +VV
Sbjct: 7   ILNEVFGYPAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPSLVRREGGFGTGIVV 66

Query: 64  SPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQPRM 123
           SPLIALM DQVA L E+GV AA LNSTLS+ +       ++ G++ +LY+APERL+ PR 
Sbjct: 67  SPLIALMQDQVAALTEVGVRAAYLNSTLSSAEAMATERALRDGDIDLLYVAPERLMTPRF 126

Query: 124 LAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREE 183
              L+   I LFAIDEAHCVSQWGHDFR EY+QL  L E FP+VPRIALTATAD  TR+E
Sbjct: 127 QELLERTRIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPNVPRIALTATADDITRDE 186

Query: 184 IVERLHLQNAERFLSSFDRSNIFYRIVPKEQPRKQLLAFLSERRS------DAGIVYCLS 237
           I+ RL L +A  F+SSFDR NI YRIV K+  R QLL F+    S      DAG+VYCLS
Sbjct: 187 IIHRLALDDARVFVSSFDRPNIRYRIVEKDNARAQLLDFIRAEHSKPDGTTDAGVVYCLS 246

Query: 238 RKKVDEVAAFLCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNV 297
           R+KV+E A +L E+G  ALPYHAG+  ++R  HQ+ F  EEG++M ATIAFGMGIDK +V
Sbjct: 247 RRKVEETAEWLKEKGMSALPYHAGMEFEIRQKHQEMFQREEGIVMCATIAFGMGIDKPDV 306

Query: 298 RFVAHMDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLE 357
           RFVAH+DLPKS+E YYQETGRAGRDG+PA+AWM YGL DVV  ++M+  S+ D+ HKR++
Sbjct: 307 RFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADDAHKRVQ 366

Query: 358 QHKLDAMLSLCEETRCRRQTLLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQGLSAIY 417
             KLDA+L LCE   CRR  LL YF E   +PCG+CDNC++   TWDAT  AR  LS ++
Sbjct: 367 TGKLDALLGLCEAATCRRVRLLGYFGES-SKPCGNCDNCLEPPDTWDATREARMALSCVF 425

Query: 418 R----TGQRYGVGHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARG 473
           R    +G  +G GHL+D+L G  +EK+   GHEKL+ +G+G A  E EWR++FRQ+VA G
Sbjct: 426 RAQRASGFHFGAGHLIDILRGNSSEKILQRGHEKLTTFGIGSALGEQEWRAVFRQLVAFG 485

Query: 474 LVDIDIEGFGGLRLNDSCRPLLKGEVSLELRRDLKPQTTAKSS--TSQASQLVRG---EE 528
            + +D EGFG L L ++ +P+LKGE ++ +RR +KP  T +SS  TS+ +    G    E
Sbjct: 486 YLTVDHEGFGSLVLTEASKPVLKGEQNVTMRRYVKPTRTRQSSGRTSERADPTIGMGPRE 545

Query: 529 REQWEALRTLRRKLAQEHSVPPYVIFPDSTLLEMLREQPTSMAEMARVSGVGARKLERYG 588
           R +WE LR  R + A+   VP YVIF D+TL E+ R  P S+ ++  + G+GARKL+R+G
Sbjct: 546 RARWERLRAWRTETAKSDGVPAYVIFHDATLAEIARNGPDSIDDLRGIPGMGARKLDRFG 605

Query: 589 QAFLEVL 595
              LEV+
Sbjct: 606 DELLEVV 612