Pairwise Alignments

Query, 249 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 287 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 90.5 bits (223), Expect = 3e-23
 Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 18/242 (7%)

Query: 17  HSHDHAQLVFGLSGHLDLEVNGRGSQVRESSVMVLPFSAHHACCSRDG-SRCLVLDVPT- 74
           H H + Q+V GL G  + EV G G+ V      V+   + HA     G S  LVL++P  
Sbjct: 47  HDHSYTQIVIGLKGQAEFEVRGMGNIVGPGQGCVVTSGSDHAFGGVVGQSDILVLNMPVP 106

Query: 75  ---EHWVLQSLGEHA--DASRRLLDQPARLTLDSRQHQLVQWLAHSPVHDPLIVQQGAIL 129
              +  +L+ L E A  D   +L  Q  RL        LVQ +  SP  D L++ +    
Sbjct: 107 SDDDPLLLRKLNELAVGDVYFQLDGQIQRLI-----QMLVQEMQASP--DDLLLGRACND 159

Query: 130 LLASL--NHPPAQPALGR--RLPYAAFNAHIERHVAHPLQVADLARIADLSVPRLHARFM 185
            + +L   H  A  ++ +  R      + +IE+H+AH + VA LA    LS  + H  F 
Sbjct: 160 TVVALLQRHISALASVHKESRFDMEVVDRYIEQHLAHRISVAQLAGSVFLSESQFHVLFK 219

Query: 186 AECGQTPMDYIRSRRLQMALDLLRKTPLPIGEIAERVGYTSQSAFAAAMLREFGASPGAL 245
            + G TP  Y+ ++R+ MA  L+ +  L +G++AE  G+++QS F     R  G SP   
Sbjct: 220 EQMGLTPHQYVLNKRVDMAKKLIEQGRLNLGQVAELTGFSNQSTFTHTFSRLHGISPSQY 279

Query: 246 RR 247
           +R
Sbjct: 280 KR 281