Pairwise Alignments

Query, 520 a.a., ATPase AAA from Pseudomonas simiae WCS417

Subject, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  204 bits (520), Expect = 4e-57
 Identities = 128/341 (37%), Positives = 187/341 (54%), Gaps = 11/341 (3%)

Query: 182 LTLHRADRVGERIYNVRKQELRGFDSIFQSSKVMAAVVREARRMAPLDAPLLIEGETGTG 241
           +T++ A R   ++ N    + + +     SS+ M AV R     A   A + I GE+GTG
Sbjct: 106 VTVNNAIRKASKLKNDVDNKNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTG 165

Query: 242 KELLARACHLASPRGQSPLMALNCAGLPESMAETELFGYGPGAFEGARAEGKLGLLELTA 301
           KE+ A A H AS RG  P +A+NCA +P+ + E+ELFG+  GAF GA  E + G  E   
Sbjct: 166 KEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATE-RQGAAEAAD 224

Query: 302 GGTLFLDGVGEMSARLQVKLLRFLQDGCFRRVGSDEEVYLDVRVICATQVDLSELCARGE 361
           GGTLFLD + EM   LQ KLLRF+Q G F++VGS +   +DVR +CAT  D  +    G 
Sbjct: 225 GGTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGR 284

Query: 362 FRQDLYHRLNVLSLHIPPLRECLDGLAPLVDHFLDQASRQIGCPLPKLAPAAMDRLSHYH 421
           FR+DLY+RL V+ LH+PPLR   D +  +    L   S++ G    +L+   ++R   Y 
Sbjct: 285 FREDLYYRLYVIPLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYE 344

Query: 422 WPGNVRQLENVLFQAVSLCEGGTVKVEHIRLPDYGVRQPLGDFSLEGGLEDIVGRFE--- 478
           WPGNVRQL+NVL   V L EG  + ++ +  P   +  P+ + +L    E+ V   E   
Sbjct: 345 WPGNVRQLQNVLRNVVVLNEGREITLDMLPPPLNQMSAPI-NRALPLAHENKVSVHEIFP 403

Query: 479 ------KAVLEALYAEHSSSRQLGKRLGVSHTTIANKLRDY 513
                 +A+ +A+ A   +  +    L VS +TI  KL+ +
Sbjct: 404 LWMTEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQTW 444