Pairwise Alignments

Query, 520 a.a., ATPase AAA from Pseudomonas simiae WCS417

Subject, 459 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  216 bits (550), Expect = 1e-60
 Identities = 138/385 (35%), Positives = 204/385 (52%), Gaps = 10/385 (2%)

Query: 136 LPELVRASKSRINGLRVKVKGDVFLADIAPLQSSEHDDSEAMAGAVLTLHRADRVGERIY 195
           +P  +  +   I G    +K   F     P  + E   S   A  +  +HR  R      
Sbjct: 77  IPVCIMTAFGSIEGAVDVMKYGAFDYITKPFSNDELLLSVQNAAELSRVHRQYRA----L 132

Query: 196 NVRKQELRGFDSIFQSSKVMAAVVREARRMAPLDAPLLIEGETGTGKELLARACHLASPR 255
               +E  G   I   SK +  V+    R AP  + +LI GE+GTGKEL+ARA H +SPR
Sbjct: 133 RANLEERYGTHQIIGRSKAIREVLDMVDRAAPSRSTVLITGESGTGKELVARAIHFSSPR 192

Query: 256 GQSPLMALNCAGLPESMAETELFGYGPGAFEGARAEGKLGLLELTAGGTLFLDGVGEMSA 315
              P +++NC  L   + E+ELFG+  G+F GA A  + G  E   GGTLFLD +GE++ 
Sbjct: 193 NSGPFVSVNCMALNPGVLESELFGHEKGSFTGAMAMRR-GRFEQADGGTLFLDEIGELTP 251

Query: 316 RLQVKLLRFLQDGCFRRVGSDEEVYLDVRVICATQVDLSELCARGEFRQDLYHRLNVLSL 375
            LQVKLLR LQ+  F RVG  +E+ +D+RV+ AT  DL +    G FR+DLY+RLNV+ +
Sbjct: 252 ELQVKLLRVLQERRFERVGGGDEIEVDIRVVAATNKDLQKEVENGTFREDLYYRLNVVHV 311

Query: 376 HIPPLRECLDGLAPLVDHFLDQASRQIGCPLPKLAPAAMDRLSHYHWPGNVRQLENVLFQ 435
            +PPLRE  + +  LV HF+++ +R  G       P A D L+ Y WPGN+RQL+NV+ +
Sbjct: 312 ALPPLRERREDIPLLVGHFVEKLARDNGMKPKTFTPEAHDYLTGYEWPGNIRQLQNVVER 371

Query: 436 AVSLCEGGTVKVE----HIRLPDYGVRQPLGDFSLEGGLEDIVGRFEKAVL-EALYAEHS 490
            + L    TV V+     IR  +  ++  +    +   L D + + E A++  AL     
Sbjct: 372 CLVLVASDTVGVDDLPPEIRDEESQLKSAVDLLPVRLDLADTLEKIEAALIRRALVRAEF 431

Query: 491 SSRQLGKRLGVSHTTIANKLRDYEI 515
              +  + LG+S + +  KL+ Y I
Sbjct: 432 VQVKAAELLGISKSLLQYKLKKYGI 456