Pairwise Alignments

Query, 246 a.a., flagellar basal body rod protein FlgF from Pseudomonas simiae WCS417

Subject, 246 a.a., Flagellar basal body rod protein:Protein of unknown function DUF1078 from Pseudomonas syringae pv. syringae B728a

 Score =  393 bits (1010), Expect = e-114
 Identities = 186/245 (75%), Positives = 224/245 (91%)

Query: 1   MDKYLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSMPVFGDSFPARAFAMTE 60
           MDK LYVAM+GAS+NA+AQKAHANNLAN+STNGF RDLEQARSMPVFG+  P+RA+AM+E
Sbjct: 1   MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSMPVFGEVMPSRAYAMSE 60

Query: 61  RPATDFTPGAMIETGRDLDVAVNGDGWMAVQTPDGGEAYVRSASMNVDALGVLRAGNGMP 120
           RP TDF+ GAM++TGR+LD+AV GDGW+AVQTPDGGEAY RS+ MN+DALGVLR G+G+P
Sbjct: 61  RPGTDFSAGAMVQTGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSGLP 120

Query: 121 IMGNGGPIAVPPQQKIEVGSDGTISIRAMGEGPRVMAEVDRIKLVQPDLKNMNKGLDGTI 180
           +MGNGGPIAVPPQQ+IE+G+DGTISIR++GE P+VMA+VDRIKLV+PDLK M KG DG I
Sbjct: 121 VMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVRPDLKTMEKGPDGLI 180

Query: 181 HTKDGQPAQADANVKLTSGFLQASNVNAVEEMTAVLALSKQFELHIKMMNSAKEDDQAMT 240
           HTK G+PA ADA V++ SGFLQASNVNAVEEMT+VLALS+QFELH+KMM +A+EDDQ+M 
Sbjct: 181 HTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQSMA 240

Query: 241 RVMQM 245
           RV+Q+
Sbjct: 241 RVLQL 245