Pairwise Alignments

Query, 261 a.a., flagellar basal body rod protein FlgG from Pseudomonas simiae WCS417

Subject, 249 a.a., flagellar basal-body rod protein FlgF from Vibrio cholerae E7946 ATCC 55056

 Score = 97.4 bits (241), Expect = 2e-25
 Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 27/256 (10%)

Query: 4   ALWVAKTGLSAQDTNLTTISNNLANVSTTGFKRDRAEFQDLLYQIKKQPGAQSTQDSELP 63
           AL++A +G       +   +NNLANVSTTGF+ D A+ + +    +  P    +  +E P
Sbjct: 4   ALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSMQAYGEGLPSRVFSM-TERP 62

Query: 64  SGLQLGTGVQIVGTQKNFSAGNLQQTGQPLDMAINGRGFFQILQPDGTTSYTRDGTFHLD 123
                           NF+ G++  TG+ LD+ I G G+  +L   G    TR+G   +D
Sbjct: 63  G--------------HNFAQGSVITTGRDLDITIQGDGWISVLDKTGKEGLTRNGNLRID 108

Query: 124 SNGQIVTANGFAL----EPAVVVPADAKTFTVGNDGTVSITVAGNPAS--QVIGNLQTAD 177
             G ++  NG  +       + +P       +G DGT+S+   G PA   +V+  ++   
Sbjct: 109 ETGLLLNGNGHPVLGETGAPITLPVPLNKVEIGGDGTISVRPQGAPADAMEVVDRIKLVR 168

Query: 178 FINPAGLQAMGNNLFLETASSGAPQIGTPGLNGFGTTLQSTLETSNVSTVEEMVNMITTQ 237
            +N   L    N LF  T  +   +      +     L   LE SNV+ + EM ++I  Q
Sbjct: 169 -LNDQSLFKDVNGLFRATDPNTQFE-----ADASVKILTGALEGSNVNAIGEMTSLIDLQ 222

Query: 238 RAYEMNSKVISTADQM 253
           R +EM  K++STA++M
Sbjct: 223 RQFEMQVKMMSTAEEM 238