Pairwise Alignments

Query, 261 a.a., flagellar basal body rod protein FlgG from Pseudomonas simiae WCS417

Subject, 262 a.a., flagellar basal-body rod protein FlgG from Vibrio cholerae E7946 ATCC 55056

 Score =  309 bits (792), Expect = 3e-89
 Identities = 154/262 (58%), Positives = 189/262 (72%), Gaps = 1/262 (0%)

Query: 1   MLPALWVAKTGLSAQDTNLTTISNNLANVSTTGFKRDRAEFQDLLYQIKKQPGAQSTQDS 60
           M PALWV+KTGL AQ TN+ TISNNLAN ST GFK+ RA F+DL YQ   QPGAQS+Q++
Sbjct: 1   MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGAQSSQNT 60

Query: 61  ELPSGLQLGTGVQIVGTQKNFSAGNLQQTGQPLDMAINGRGFFQILQPDGTTSYTRDGTF 120
            LPSGL LG G ++V TQK  + GN+Q T   LDM I G GFFQIL PDG  +Y+R+G F
Sbjct: 61  RLPSGLMLGAGSKVVATQKVHTNGNVQTTSNSLDMMIEGDGFFQILMPDGNIAYSRNGQF 120

Query: 121 HLDSNGQIVTAN-GFALEPAVVVPADAKTFTVGNDGTVSITVAGNPASQVIGNLQTADFI 179
            LD  G IVT+  G+ L+P +++P DA + T+GNDG VS+ V G   +QV+G + T DFI
Sbjct: 121 TLDDEGAIVTSGAGYRLQPEIIIPEDAISITIGNDGEVSVRVRGQQDNQVLGQITTVDFI 180

Query: 180 NPAGLQAMGNNLFLETASSGAPQIGTPGLNGFGTTLQSTLETSNVSTVEEMVNMITTQRA 239
           NP GL+ +G NL+L T +SG PQ G PGL+G G   QS LETSNV+  EE+VNMI  QR 
Sbjct: 181 NPGGLEPVGQNLYLPTGASGEPQEGVPGLDGLGDIRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 240 YEMNSKVISTADQMLSFVTQNL 261
           YEMNSKVIS  D+M+SFV Q L
Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262