Pairwise Alignments

Query, 231 a.a., flagellar basal body L-ring protein from Pseudomonas simiae WCS417

Subject, 224 a.a., flagellar basal body L-ring protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  200 bits (508), Expect = 2e-56
 Identities = 107/227 (47%), Positives = 145/227 (63%), Gaps = 10/227 (4%)

Query: 8   LALSGIAVLAGCVAPT--PKPNDPYYAPVLPRTPLPAAANNGSIYQAGFEQNLYSDRKAF 65
           L +  + VLAGC +    P P+DPYYAPV+P  P  A    GSI+      +LY+D +A 
Sbjct: 5   LMVGSLLVLAGCASTEHKPIPDDPYYAPVVPEEPPVALEPTGSIFLDSQAASLYTDIRAH 64

Query: 66  RVGDIITITLNERTQASKNANSQVGKTSKAGI-GLTSLFGAVPNVNNPLGDGDLSLSAGY 124
           RVGDIIT+ L E TQA+K+AN+++ K S   +  + +L G V    NPL       S GY
Sbjct: 65  RVGDIITVVLTESTQATKSANNEIKKGSDLNMDAIQALGGPVTISGNPL-------SLGY 117

Query: 125 SGDRATNGKSAAGQGNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGMVRA 184
           S    T  ++ A Q NSL G+I+  V  VL NG + +RGEKW+++N GDE +R+ G++R 
Sbjct: 118 SDSMNTKREADADQSNSLRGNISAHVLQVLANGNLVIRGEKWISINNGDEFIRVTGVIRP 177

Query: 185 DDISTDNTVPSTRIADARITYSGTGAFADASQPGWFDRFFLSPLFPF 231
            DI+TDNTV STR+A+ARI YSGTG FA++ Q GW  +FFLS  +PF
Sbjct: 178 QDITTDNTVVSTRVANARIQYSGTGTFANSQQVGWLSQFFLSDWWPF 224