Pairwise Alignments

Query, 423 a.a., flagellar rod assembly protein FlgJ from Pseudomonas simiae WCS417

Subject, 312 a.a., flagellar assembly peptidoglycan hydrolase FlgJ from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (337), Expect = 4e-36
 Identities = 66/151 (43%), Positives = 95/151 (62%), Gaps = 1/151 (0%)

Query: 259 FSSQDEFVATMLPMAKAAAARIGVDPKYLVAQAALETGWGKSVMRAEDGSSSHNLFGIKA 318
           F S+  FV  + P A  AA  +GVD   L+AQAALETGWG+ +++   G+S+ NLF IKA
Sbjct: 158 FDSRHSFVTKLKPYADKAARMLGVDSSLLIAQAALETGWGQKMVKNARGNSN-NLFNIKA 216

Query: 319 GQSWQGGQARAITSEFRDGAMVKETAQFRSYSSYQDSFHDLVTLLQSNDRYKEVVKSADN 378
            +SWQG +    T E+ +   V E A FRSY+S+ +SF+D V  L++N RY   +    N
Sbjct: 217 DRSWQGDKVATQTLEYHNNVPVVEKAAFRSYASFDESFNDYVRFLENNPRYTNALDHGGN 276

Query: 379 PEQFVRELQKAGYATDPAYASKISQIAKTMD 409
            E+F+  + +AGYATDP YA K+ ++   +D
Sbjct: 277 SERFIHGIHRAGYATDPQYADKVLRVKAQID 307



 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 6/113 (5%)

Query: 10  ISSTADSGSYSDLNRLNQLKV----GDDKNSEGNMRKVAQEFESLFLSEMLKSMRSATEA 65
           I+++ D G   D+  L++L+     GD+   +  +   A++FES+F S MLKSMR A   
Sbjct: 2   INNSNDIGFIQDIAGLDKLRQKAVNGDENAGQSALTAAARQFESIFTSMMLKSMRDANSD 61

Query: 66  LGKDNPMNTPAAKQYQEMYDQQLAVSMSREGGGIGLADVLMRQMQKNKPVEAQ 118
             K + M++     Y++M D+Q+A   S   G +GLAD+++ Q+   +    Q
Sbjct: 62  F-KSDLMSSQNEDLYRQMLDEQMASEFS-SSGSLGLADMIVAQLSTGQTASEQ 112