Pairwise Alignments

Query, 681 a.a., flagellar hook protein FlgK from Pseudomonas simiae WCS417

Subject, 587 a.a., flagellar hook-associated protein FlgK from Rhodopseudomonas palustris CGA009

 Score =  106 bits (265), Expect = 3e-27
 Identities = 161/698 (23%), Positives = 284/698 (40%), Gaps = 142/698 (20%)

Query: 5   SIGMSGLNASQGALSVLSNNIANANTSGYSRQQTTQSASASNPYGGVFIGSGTTLADVRR 64
           SI  SGL A+Q  +SV S NI+NA+T+GY+++   Q++S +   GGV  G+G T+  +  
Sbjct: 8   SIAFSGLAATQVQISVTSANISNADTTGYTKKTAGQASSVT---GGV--GTGVTVTGITS 62

Query: 65  -----------VYNEFLDAAYQNSTALNNDAKAYSSQASAIDKTLSDKTTGMSSVLSAFF 113
                        N  L AA   ++ L +  + Y S  SA   T +   T +++ L++  
Sbjct: 63  SVDKLLLKSLIAANSDLGAAGTTNSYLTSLQQLYGSSTSA---TSTSTGTSLANTLASLE 119

Query: 114 AAVQTSAANPSDVSARQVLLTSAQTLSNRFNSISTQLNQQKESINGQLKTMSDQVNQLTS 173
           +A+ + A+ P+  + +  ++ +   ++++    S+ + + + + +  + +    VN    
Sbjct: 120 SALSSLASTPTSSALQSNVVDALDGVTSQLRETSSGIQKLRSNADQDIASAVGSVNDDVQ 179

Query: 174 SIASLNKQITQAQGSSNSAPANLLDARNEAVRSLNELVGVT-AVEKNGVFSVSTGTGQSL 232
            IA LN  I QA  +  S  A+L D RN A++ L+  + V+     NG   V T TGQ+L
Sbjct: 180 KIADLNAAIKQAAAAGQST-ADLEDKRNTALQDLSSQMNVSYYTASNGDLQVYTATGQAL 238

Query: 233 VLGDQSNSISAVPSSSDPSQYTIQLNAGGG-------TSVDMGNVLSGGSIGGLLRYRSD 285
           V     +S +   S +  +  +   N G G         VD+ + ++ G IG L+  R  
Sbjct: 239 V-----DSTAHPLSYTTTASVSAATNYGSGGFSGIMLNGVDVTSQITSGKIGALVALRDQ 293

Query: 286 VLMPAINDLGRIAIVTADTINSQLGQGVDLNGDFGSSLFKDINSAAAIAQRSVGAAGNSA 345
            L  A + L  +A     ++N+       L              A+     +V +A   +
Sbjct: 294 TLPAAQSQLDELAQQFVVSLNAVSNGQTTLPA-----------PASLTGTATVSSADALS 342

Query: 346 GSGNLNVTISDTS-KLTPYDYKVTFTSGNNYTVMRSDGKSMGAFDTTTTPPPVIDGFTLA 404
            +G++ + ++D+S KL  Y       S  + +   S G  + A +        + G + +
Sbjct: 343 ATGSVRLAVTDSSGKLISY-------SDLDLSSYTSVGDLVNAING-------VSGLSAS 388

Query: 405 LDGKGPMAAGDSFKVSPTANGATNIGTDLKD-ANKIAFAGPLLGEGSKTNQGTGTFTPPT 463
           +D  G +      K++ T   A+N G  + +  + +  AG    +    N          
Sbjct: 389 IDSSGHL------KIAAT---ASNTGVSIGELTSSVGSAGEGFSDCFGLNDLVTATGASD 439

Query: 464 LTVPIDIHGGANTAQLRTGIEHSMPVKMVFGKPAADGTQAYTVNDAQGNPIGTGSIIPGQ 523
           + V  DI  G ++  L T    S    +  G        A   N           ++ G 
Sbjct: 440 IAVRSDILSGKSSLSLAT---LSSAAALTTGSSVLSSDGASAAN-------ALYDVLTGS 489

Query: 524 TNKITIDVPMRDANGALVVPAKSFKFDTAVGGAPADGDSTTFSFNASGKSDNRNAQALLD 583
           T+          A G L           AV G+ AD  ST  S + SGK+          
Sbjct: 490 TS--------FKAVGGL----------AAVTGSFADIASTIVS-SVSGKA---------- 520

Query: 584 LQTKATVGLADGSGGGVSLVAANSRLVSTVGAKAASGITDTTATGALLKANQDARNSVSQ 643
                                  S+  ST  AK A+  T             ++ +S S 
Sbjct: 521 -----------------------SQASSTYSAKEAAQST-----------YANSLSSQSG 546

Query: 644 VNLDEEAGDMIKFQQYYTASSQIIKAAQETFSTLINSL 681
           VNLDEE+  + + Q  YTA+SQ+I+A    F+ L++++
Sbjct: 547 VNLDEESARLSELQNKYTAASQLIQAINAMFTALVSAV 584