Pairwise Alignments

Query, 534 a.a., flagellar hook protein FlgL from Pseudomonas simiae WCS417

Subject, 397 a.a., flagellar hook-associated protein 3 from Vibrio cholerae E7946 ATCC 55056

 Score = 91.7 bits (226), Expect = 5e-23
 Identities = 51/181 (28%), Positives = 95/181 (52%), Gaps = 1/181 (0%)

Query: 2   RISTAQYFETTSAKYSDNYSSVVKAQNQASTGVRVETASDDPVAAARLLMLQQQKDMLSQ 61
           RIS+   ++          S V   Q Q ++G ++ +ASD+P+A   +  + QQ++ L Q
Sbjct: 4   RISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQ 63

Query: 62  FNGNITSLKNSLTNEESVLGSINDALQKASELALRA-GGSLSDADRKSIAGEIGAIEDQV 120
           +   I  ++N L ++E ++ +  +    A    +    GSLS  DR + A  +  + +  
Sbjct: 64  YLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMANNF 123

Query: 121 LGLLNSKDASGNYLFSGSKTATPPYSRNSDGTYTYQGDETPLSLQVSDTLEIQAGDTGKS 180
           + L N +D SGNY+F+G+K    P+ R++ G  TY GD+    +++S++LEI   + G  
Sbjct: 124 INLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYAGDDYQRKMKISNSLEIPFNNPGSK 183

Query: 181 I 181
           +
Sbjct: 184 V 184



 Score = 55.8 bits (133), Expect = 3e-12
 Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 11/163 (6%)

Query: 372 DSKAIATGDTGGGTTVTAAGVTFDVSGTPQSGDQFAVAATTQKTQNALDTLSQ-LRHALE 430
           +   +  G+    T +    +   V G    GD  A+  T + T +  DT    +R+A  
Sbjct: 242 NGSVVQAGEFDAKTGIQFEELNIQVKGQISKGD--AIELTPRTTFSVFDTFRDAIRYAEG 299

Query: 431 QPADG-NPAAMIKLKDALDASIANFGNTRTQVDNVRGSIGARQNALDIQTSENTSIGLAN 489
             +D  N A + +L +    +  +   TRT        IGAR + LDIQ  ++    ++ 
Sbjct: 300 SVSDASNTAKLHQLVEEFHTAFIHLNKTRTD-------IGARLSTLDIQEEQHEDFKISL 352

Query: 490 TSTMSDLGNIDTAQAAINLTLQQTMLQASQLAFVKISQLSLFN 532
             + S   ++D A+A I        L+ASQ AF K   L+LFN
Sbjct: 353 AKSKSTFEDLDYAEAVIEFNENSRALEASQKAFGKTKDLTLFN 395