Pairwise Alignments

Query, 309 a.a., beta-ketoacyl-ACP synthase from Pseudomonas simiae WCS417

Subject, 316 a.a., 3-oxoacyl-ACP synthase III from Vibrio cholerae E7946 ATCC 55056

 Score =  108 bits (271), Expect = 1e-28
 Identities = 90/318 (28%), Positives = 153/318 (48%), Gaps = 23/318 (7%)

Query: 4   IKSIASYVPADGIDNYAQGAKFAKDEEFIIGKIGSAFLPRKEAA--QETSDLCVEAV-NA 60
           I    SY+P+    N          +E+I+ + G     R+ AA  +  +D+   A  NA
Sbjct: 5   ILGTGSYLPSQVRTNADLEKMVETSDEWIVARTG--IRERRIAADNETVADMAFFAAQNA 62

Query: 61  LFANNPDLKRESIDALIVVTQNGDEEGLPHTAAIVQDKLGLPTHVAAFDISLGCSGYVYG 120
           +  N   + +  ID +IV T +      P  A  VQ KLG+     AFD++  CSG++Y 
Sbjct: 63  I--NMAGIDKHDIDMIIVATTSASHT-FPSAACQVQGKLGIKG-CPAFDLAAACSGFMYA 118

Query: 121 IYAMKGFMEAAGLKNGLLITADPYSKIVDPEDRNTTMLFGDAATATWMG-EDAPWLLGKS 179
           +      +++   K+ L+I AD  SK  DP DR+T +LFGD A A  +G  + P +L  +
Sbjct: 119 LSIADQHVKSGMCKHVLVIGADALSKTCDPTDRSTIILFGDGAGAVVVGASNEPGIL-ST 177

Query: 180 KFGTDGSGAPHLKV--------SDGVFFMNGRQVFNFALLKVPAHLHELLNESDLKADEI 231
               DG     L +        SD    M G +VF  A+ ++   + + L  +++   E+
Sbjct: 178 HIHADGEFGDLLSLEVPVRGGDSDKWLHMAGNEVFKVAVTQLSKLVVDTLKANNMHKSEL 237

Query: 232 DAFCIHQGSAAIVDAVARRFEDAPVDKFIKDMVETGNTVSSSIPLLLEKHVMDATWKR-- 289
           D    HQ +  I+ A A++     +D+ +  +   GNT ++++P  L++ V D   +R  
Sbjct: 238 DWLVPHQANYRIISATAKKL-SMSLDQVVITLDRHGNTSAATVPTALDEAVRDGRIQRGQ 296

Query: 290 -VAISGFGVGLSWGSAIL 306
            + +  FG G +WGSA++
Sbjct: 297 MLLLEAFGGGFTWGSALV 314