Pairwise Alignments

Query, 473 a.a., branched-chain alpha-keto acid dehydrogenase subunit E2 from Pseudomonas simiae WCS417

Subject, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

 Score =  199 bits (505), Expect = 2e-55
 Identities = 126/347 (36%), Positives = 192/347 (55%), Gaps = 38/347 (10%)

Query: 1   MALTVNTNIASITTQNGLGKAANSLQTSMQRLSTGLSINSAKDNASGLQISNRLTSQING 60
           MA+ VNTN++++T Q  L  A N+ Q+SM+RLS+G  INSAKD+A+GLQISNRL  Q  G
Sbjct: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60

Query: 61  LGQAVKNANDGISIAQTAEGAMQASTDILQKMRTLALSSATGSLSDADRTSNQEEYQALT 120
           LG AV+NANDGIS+AQTAEGAM+ +T+ILQ+MR L+L SA GS S ADR + QEE  AL 
Sbjct: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120

Query: 121 SELTRISQTTTFGGQKLLDGSYGTKAIQVGANANETINLSLDNVAANN--IGSQQIKSVG 178
            EL R+++TT+FGG KLL+G++ TK+ Q+GA+  E + L++ ++ ++N  +G +  ++  
Sbjct: 121 DELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAAN 180

Query: 179 VAPSASGVAGGVIGIT-------GNGQTNSVTVAAGSSAKTIASQLNGAVGGLSASASTE 231
                 GV  G   +T           T S+    G   + +A+ +NG    + AS   E
Sbjct: 181 GKDKNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEE 240

Query: 232 AQF--------VVGAAAKTAPATFSMTVGG---------QTTTFTGVTDTASLAD----Q 270
            +         + GAA         + +G            TT  G  ++ ++ D     
Sbjct: 241 GKLQLFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKY 300

Query: 271 LKSNAAKLGISV--------NFDEAKQSLSVKSDSGENLEFSAATAA 309
           + S+ A+LG           N D   ++++      ++ +F+  T A
Sbjct: 301 VDSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTA 347



 Score = 97.1 bits (240), Expect = 9e-25
 Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 17/201 (8%)

Query: 275 AAKLGISVNFDEAKQ---SLSVKSDSGENLEFSAATAAGSITVATKDGSGSYGSAVAIAN 331
           A K  +++   + ++   ++S+ +  G+++E   AT     T   K      G      +
Sbjct: 190 AGKTDLTITLKDKREGDVTISINAKEGDDIE-ELATYINGQTDMIKASVDEEGKLQLFTD 248

Query: 332 GLKATGAVNLDSSKGYALNGAGVTGLFAATGTAAASAKTSVAQTDVTSAFNAQSAIAVID 391
             +  GA       G AL  AG  G+ AA          +V   DVT+   AQ ++A++D
Sbjct: 249 NNRIDGAATF----GGAL--AGELGIGAAQDV-------TVDTLDVTTVGGAQESVAIVD 295

Query: 392 KAIGGIDSVRSGLGAVQNRLTTTVDNLTNIQKNSTAARSTVQDTDFAAETAELTKQQTLQ 451
            A+  +DS R+ LGA QNR    ++NL NI +N  A++S ++DTDFA ET  LTK Q L 
Sbjct: 296 AALKYVDSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILS 355

Query: 452 SAATAILSQANQLPSAVLKLL 472
            A++++L+QA Q P++ L LL
Sbjct: 356 QASSSVLAQAKQAPNSALALL 376