Pairwise Alignments

Query, 473 a.a., branched-chain alpha-keto acid dehydrogenase subunit E2 from Pseudomonas simiae WCS417

Subject, 401 a.a., flagellin D protein from Sinorhizobium meliloti 1021

 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 68/323 (21%), Positives = 130/323 (40%), Gaps = 29/323 (8%)

Query: 4   TVNTNIASITTQNGLGKAANSLQTSMQRLSTGLSINSAKDNASGLQISNRLTSQINGLGQ 63
           ++ TN+A++     L    ++++ +  R+S+GL + +A DNA+   I+  + S    L  
Sbjct: 3   SILTNVAAMAALQTLRGIDSNMEETQARVSSGLRVGTASDNAAYWSIATTMRSDNMALSA 62

Query: 64  AVKNANDGISIAQTAEGAMQASTDILQKMRTLALSSATGSLSDADRTSNQEEYQALTSEL 123
                  G +   TA   M+ + ++++++R   +++    +   D+   QEE + L  +L
Sbjct: 63  VQDALGLGAAKVDTAYAGMENAVEVVKEIRAKLVAATEDGV---DKAKIQEEIEQLKQQL 119

Query: 124 TRISQTTTFGGQKLLDGSYGTKAIQ----------VGANANETINLSLDNVAANNIGSQQ 173
           T I+   +F G+  L     T   +           G  + +TI+  LD    N++    
Sbjct: 120 TSIATAASFSGENWLQADITTPVTKSVVGSFVRDSSGVVSVKTIDYVLD---GNSVLFDT 176

Query: 174 IKSVGVAPSASGV--AGGVIGITGNGQTNSVTVAAGSSAKTIASQLNGAVGGLSASASTE 231
           +   G+      V  A   + +  NG T   TVAA +  + IA+   GA       ++  
Sbjct: 177 VGDAGILDKIYNVSQASVTLPVNVNGTTTEYTVAAYAVDELIAA---GAT--FDGDSANV 231

Query: 232 AQFVVGAAAKTAPATFSMTVGGQTTTFTGVTDTASLADQL--KSNAAKLGISVNFDEAKQ 289
             + V A        F    G    T+    D A+   ++       K G+      A  
Sbjct: 232 TGYTVPAGGIDYNGNFVKVEG----TWVRAIDVAATGQEVVYDDGTTKWGVDTTVAGAPA 287

Query: 290 SLSVKSDSGENLEFSAATAAGSI 312
              V   S EN++ + A  A ++
Sbjct: 288 INVVAPASIENIDITNAAQAANL 310



 Score = 45.4 bits (106), Expect = 3e-09
 Identities = 62/287 (21%), Positives = 112/287 (39%), Gaps = 18/287 (6%)

Query: 199 TNSVTVAAGSSAKTIASQLNGAVGGLSASASTEAQFVVGAAAKTAPATFSMTVGGQTTTF 258
           T+  T A+ S    + + +   V     + S    FV  ++   +  T    + G +  F
Sbjct: 120 TSIATAASFSGENWLQADITTPV-----TKSVVGSFVRDSSGVVSVKTIDYVLDGNSVLF 174

Query: 259 TGVTDTASLADQLKSNAAKLGISVNFDEAKQSLSVKSDSGENLEFSAATAAG---SITVA 315
             V D   L      + A + + VN +      +V + + + L  + AT  G   ++T  
Sbjct: 175 DTVGDAGILDKIYNVSQASVTLPVNVNGTTTEYTVAAYAVDELIAAGATFDGDSANVTGY 234

Query: 316 TKDGSG-SYGSAVAIANGLKATGAVNLDSSKGYALNGAGVTGLFAATGTAAASA-----K 369
           T    G  Y        G     A+++ ++    +   G T     T  A A A      
Sbjct: 235 TVPAGGIDYNGNFVKVEGTWVR-AIDVAATGQEVVYDDGTTKWGVDTTVAGAPAINVVAP 293

Query: 370 TSVAQTDVTSAFNAQSAIAVI---DKAIGGIDSVRSGLGAVQNRLTTTVDNLTNIQKNST 426
            S+   D+T+A  A +  A+I   D+A+  + S  S LG++  R+    + ++ +  +  
Sbjct: 294 ASIENIDITNAAQAANLDALIRGVDEALEDLISATSALGSISMRIGMQEEFVSKLTDSID 353

Query: 427 AARSTVQDTDFAAETAELTKQQTLQSAATAILSQANQLPSAVLKLLQ 473
           +    + D D   E+  L   QT Q  A   LS AN     +L+L +
Sbjct: 354 SGIGRLVDADMNEESTRLKALQTQQQLAIQSLSIANTNSENILQLFR 400