Pairwise Alignments

Query, 462 a.a., flagellar cap protein FliD from Pseudomonas simiae WCS417

Subject, 666 a.a., flagellar hook-associated protein 2 from Vibrio cholerae E7946 ATCC 55056

 Score = 92.8 bits (229), Expect = 3e-23
 Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 11/208 (5%)

Query: 8   GVGSGIDIQGIVKSLVDADRAPKQTQINTQSQKATTQLSSIGKIQSALDAFRGAIKSMTD 67
           G+ +G DI G+V  +V A+R PKQ +I+ +     T +S+ G+++ +LD  +  +     
Sbjct: 7   GMNTGFDINGMVSKIVSAERVPKQQRIDNERTNIDTSISAYGRLRESLDTMKNLMTQFRQ 66

Query: 68  DNSFSGLTGTSSNEKVATMTTGKGAANGSFNLVVNQLAQPSKLSTTTLTGGASTVVNKGD 127
           + +F+     +SNE+V + T    A  G++++ V QLAQ  K+++  L   A     K  
Sbjct: 67  EKAFAVRKVDTSNEQVVSATATTEAIAGNYSVDVLQLAQSHKIASEVLDKDAKFGPGK-- 124

Query: 128 TATTLSISQSGKKFDVSVPPGATLQQVRDSINSQFGTSGLSANIVTDASGSRMVLTSTTG 187
               L IS   K F + V   + L  +   IN +    G+ A+I+ D  G R+++ S   
Sbjct: 125 ----LHISLGDKSFTLDVQGNSKLVDIVRGINGEKSNPGVRASIINDVEGPRLIVASNVS 180

Query: 188 GVGSDLTLS-----GNSGIDTGYKVIDE 210
           G    + +S     GN      YK +++
Sbjct: 181 GKDHSVKMSAQAEPGNPLKQLEYKTLEQ 208