Pairwise Alignments

Query, 462 a.a., flagellar cap protein FliD from Pseudomonas simiae WCS417

Subject, 678 a.a., flagellar filament capping protein FliD from Ralstonia sp. UNC404CL21Col

 Score =  150 bits (380), Expect = 1e-40
 Identities = 137/500 (27%), Positives = 222/500 (44%), Gaps = 84/500 (16%)

Query: 5   TVNGVGSGIDIQGIVKSLVDADRAPKQTQINTQSQKATTQLSSIGKIQSALDAFRGAIKS 64
           ++ G+G+ ID+  +V  L+ A+ +   T   TQ +   TQLS++G ++SAL  F+ A+ +
Sbjct: 15  SIPGIGTNIDVNNLVTKLMQAE-SKGMTLRQTQQKAFQTQLSAVGSLKSALSTFQTAMAA 73

Query: 65  MTDDNSFSGLTGTSSNEKVATMTTGKGAANGSFNLVVNQLAQPSKLSTTTLTGGASTVVN 124
           + + ++F+G   +  +  + T +    A  G++ + V QLAQ   LS    T   + +  
Sbjct: 74  LNNPDTFTGNKASGHDTSILTASLSNTAPAGTYQVNVTQLAQAQVLSAAGQTSSKTPI-- 131

Query: 125 KGDTATTLSIS--------------------QSGKKFDVSV---PPGATLQQVRDSINSQ 161
            G T TTL+ S                    Q+G +   S+   P   TL  +RD+IN+ 
Sbjct: 132 GGGTPTTLTFSFGSVSGGSFANGKYTGATFTQNGNQAGGSITIDPSNNTLAGIRDAINN- 190

Query: 162 FGTSGLSANIVTDASGS--RMVLTSTTGGVGSD--LTLSGNSGIDT----------GYKV 207
               G+SA+IV D S S  R+VLTST GG  S+  + +SG+S + +              
Sbjct: 191 -ANVGVSASIVNDGSDSPYRLVLTSTAGGANSEMKIAVSGDSTLQSLLSHDPAGTQNMTE 249

Query: 208 IDEPKNAEYTIDGVAYTAKTNNITDAVSGVSIKLLSVSPPVSSTDPTKAVTTISVSTSTA 267
           +   +NA  T++G+   + TN +TD V G S  L                TT++V +   
Sbjct: 250 VATGRNAMATVNGINVQSATNTLTDVVDGTSFTLAKTGS-----------TTVTVGSDAG 298

Query: 268 ALKSGVKGFVDSYNALLKAMNAETKVTKDAAGNSVSATLTGDANMRSLQSALRSEFNALS 327
                V  FV +YNAL   +NA TK   D A  + +  L GD + +++ + L        
Sbjct: 299 QASQSVLNFVKAYNALRIQLNALTKF--DTANPANNGALAGDVSTKAMINQLTDVLGQGI 356

Query: 328 GNGQFKSLAQFGIGTDSNTGLLTMDDKAFDKAALTNAADINSMLGG----KDGLLARMT- 382
           GNG F+SL   G+  D   G L++DD     A   + + + ++  G     D LL   + 
Sbjct: 357 GNGAFQSLGSIGVTMDKE-GTLSIDDAKLTAALKKSPSQVAALFAGTGTATDSLLKVSSF 415

Query: 383 ---------------AATDGYAKPTTGVFATRSSALSDSLKKLTKDQSDLDAHVQDLTDS 427
                           AT G  K +     T  S ++DS   L+   S +  ++Q    S
Sbjct: 416 STTTQAGSYAINVTQLATQGSLKGSAAANTTIQSGVNDS---LSVTLSGITTNIQVPAGS 472

Query: 428 LTRKYAAMDSLVAQLRQQSN 447
            T       SL AQ++ Q N
Sbjct: 473 YT-----ASSLAAQIQSQIN 487