Pairwise Alignments

Query, 491 a.a., ATPase AAA from Pseudomonas simiae WCS417

Subject, 350 a.a., sigma54 specific transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  293 bits (750), Expect = 6e-84
 Identities = 163/341 (47%), Positives = 227/341 (66%), Gaps = 12/341 (3%)

Query: 146 LVGTSRAIQHVRQMMQQVADTDASVLILGESGTGKEVVARNLHYHSKRRDGPFVPVNCGA 205
           ++G S +++ V +++ +VA TD++VL+ GESGTGKE++ R LH +S+RR  PFVP+NCGA
Sbjct: 8   IIGQSTSLRDVFRILAKVAPTDSTVLVTGESGTGKELLVRALHSNSQRRSMPFVPINCGA 67

Query: 206 IPAELLESELFGHEKGAFTGAITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQER 265
           IP ELLESELFGHEKGAFT AI SR GRFELA+GGT+FLDEIG+M L +QVK+LRVLQE+
Sbjct: 68  IPKELLESELFGHEKGAFTHAIRSRPGRFELADGGTIFLDEIGEMDLTLQVKILRVLQEK 127

Query: 266 TFERVGSNKTQSVDVRIIAATHKNLESMIEVGSFREDLYYRLNVFPIEMAPLRERVEDIP 325
             ERVG    + VDVRI+AAT+++LE  +  G FREDLYYRLNV P+ +  LRER  DI 
Sbjct: 128 EIERVGGAGVKKVDVRIVAATNRDLEREVAAGRFREDLYYRLNVIPLHLPALRERGGDIL 187

Query: 326 LLMNELISRM-EHEKRGSIRFNSAAIMSLCRHGWPGNVRELANLVERMAIMHPYGVIGVV 384
           +L    + R  E + R  +         L  + WPGNVREL N +ER++I+    V+   
Sbjct: 188 VLAEHFMRRFCERKGRRCLALAPDTRKVLAAYSWPGNVRELENFMERLSILADDDVVPPA 247

Query: 385 ELPKKFRYVDDEDEQLVDSLRTDMEERV-----AINGHTP---DFGSTAMLPPEGLDLKD 436
           +LP+K   + DE   +V        + +     A +G  P    + +   L  +G++LKD
Sbjct: 248 DLPRK---ILDEVGDIVSLPEPTPPDPLPVATGAASGGMPAGFSWPTITDLRDKGMNLKD 304

Query: 437 YLGNLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRK 477
           +L  +E+ L+ +AL  A G+  +AAE L I+RTTL+EK++K
Sbjct: 305 FLDTVEERLLDEALTMAEGVKNQAAEILGIKRTTLIEKLKK 345