Pairwise Alignments

Query, 403 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  266 bits (681), Expect = 5e-76
 Identities = 148/342 (43%), Positives = 216/342 (63%), Gaps = 9/342 (2%)

Query: 66  QRMEELAEKERLANRLQNLLSLLPGGVIVIDEEGRVREANPAACDMLGLPLEGELWRHVI 125
           ++   L   E    R + +L ++P GVI++D +G VREANP A  +L +PL GE W  VI
Sbjct: 8   EQHSHLDSLEDQVERYKQVLDVMPAGVILLDTQGIVREANPEAQRLLDVPLVGEKWYSVI 67

Query: 126 TRCFAPREDDGHEISLKDGRRLSIATRSLDAEPGQLVLLNDLTETRHLQDQLARHERLSS 185
              FAPR+DDGHEISL++GR++ +A  +  +  GQL+L+ DLTETR LQ +++  +RLSS
Sbjct: 68  QIAFAPRDDDGHEISLRNGRKVRLAISA--STTGQLILITDLTETRLLQSRISDLQRLSS 125

Query: 186 LGRMVASLAHQIRTPLSAALIYASHLTDEQLPGATHQRFAGRLKERLHELEHQVRDMLVF 245
           LGRMVASLAHQ+RTPLS+A++YA++L    LP AT +RF  +L +RLH+LE QV DML+F
Sbjct: 126 LGRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERFQSKLVDRLHDLEKQVNDMLLF 185

Query: 246 ARG-----ELPLTDRITPAGLMQALQAAAAPHIQDVQVRWQCDSHLGELLCNRDTLVGSL 300
           A+G      +P +     A  M  ++ A   +   +    + +S    LL N + L  +L
Sbjct: 186 AKGGDNKVVMPFSIGDLAAEFMPMVETALKNN--QIDYGQEVESEETMLLGNANALASAL 243

Query: 301 LNLIENATQASGPGARLKVHLYNRGQNLRLCISDSGSGIEPAVLQRLGEPFFTTKTNGTG 360
            NL+ NA Q +G G+++ V        L++ + D+G G+  ++  ++ EPFFTT++ GTG
Sbjct: 244 SNLVMNALQIAGKGSQIDVFFRPVNGELKISVQDNGPGVPESLQHKIMEPFFTTRSQGTG 303

Query: 361 LGLTVVKAVARAHQGELQLHSRVGRGTCALMTLPLFSGAASA 402
           LGL VV+ V RAH G L+L S+ G G C  M +PL   A S+
Sbjct: 304 LGLAVVQMVCRAHGGRLELISKEGEGACFTMCIPLERQADSS 345