Pairwise Alignments

Query, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  284 bits (726), Expect = 5e-81
 Identities = 179/460 (38%), Positives = 263/460 (57%), Gaps = 20/460 (4%)

Query: 5   VLLVEDDRALREALADTLLLAGHDYRAVGSAEAALEAVEQESFSLVVSDVNMPGMDGHQL 64
           V +V+DD ++R  +  TL  A         AE+ L A+E+E+  ++VSD+ MPGMDG  L
Sbjct: 6   VWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIAL 65

Query: 65  LGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPF---EPKALIELVVRHA--- 118
           L  +  R P+LPV++MTAH  ++ AV+A +QGA +YL KPF   E   L+E  + H    
Sbjct: 66  LNQVHQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQ 125

Query: 119 --LGVIPPSDGEGP--IAFEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQ 174
                 P  +   P  I   PA  ++     R++RS  +VLI+GESGTGKE++A  +H+ 
Sbjct: 126 RKTSHRPSENYSAPEIIGEAPAMQEVFRAIGRLSRSSISVLINGESGTGKELVAHALHRH 185

Query: 175 STRAKQPFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEM 234
           S RA++PFIA+N AAIP +++E+ LFGHEKG+FTGA   + G+FEQA+GGT+ LDEI +M
Sbjct: 186 SPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLDEIGDM 245

Query: 235 PLGLQAKLLRVLQEREVERVGARKPIQLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVF 294
           PL +Q +LLRVL + +  RVG    I++D+R+VA T+++L   V  G+FREDLF+RL+V 
Sbjct: 246 PLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLNVI 305

Query: 295 PLAWRPLRERPADIIPLAERLLNNHVKKMKHAQAGLSAEAQACLIAYPWPGNVRELDNAI 354
            +    LRER  DI  L +  L    K++      L+      L    WPGNVR+L+N  
Sbjct: 306 RIHIPSLRERRQDIEKLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLENMC 365

Query: 355 QRALILQQGGLIQPQDFC--LAMGSGAAPLPTLAPTPVVVE--AETAGALGDD----LRR 406
           +   ++  G  + P D    L     A+           +E  A++A A G+        
Sbjct: 366 RWLTVMASGSEVLPSDLPSELLSERKASHFDNDISWQKQLETWAKSALASGETELLAYAL 425

Query: 407 REFQMII--DTLRSERGRRKEAAERLGISPRTLRYKLAQM 444
            EF+ I+    L    G ++EAA+ LG    TL  KL ++
Sbjct: 426 PEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKEL 465