Pairwise Alignments

Query, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 474 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  434 bits (1116), Expect = e-126
 Identities = 251/470 (53%), Positives = 315/470 (67%), Gaps = 28/470 (5%)

Query: 3   IKVLLVEDDRALREALADTLLLAGHDYRAVGSAEAALEAVEQESFSLVVSDVNMPGMDGH 62
           + +L+VEDD  LREA+ DTL LAG    +  S   AL+ + +   ++VVSDV M  MDG 
Sbjct: 5   LPILVVEDDPNLREAVVDTLELAGEAVLSAASGPEALKVLAERPVAIVVSDVRMEPMDGI 64

Query: 63  QLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALIELVVRHALGVI 122
            LL  +R + P LPV+LMTA   V+RAV+AMR GA D+L+KPFEPKAL+E V R+ L   
Sbjct: 65  TLLKEIRGQYPHLPVVLMTAFADVDRAVEAMRAGACDFLLKPFEPKALLEHVARYRL--- 121

Query: 123 PPSDGEGP--IAFEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSTRAKQ 180
            P+ GE    +A + AS  L  LAARVA++D+TVL++GESG GKEV+ARYIH  S R K 
Sbjct: 122 -PAMGEDSDVVAVDAASRNLFSLAARVAQTDATVLLTGESGVGKEVVARYIHNHSARRKG 180

Query: 181 PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQA 240
           PF+AINCAAIP+++LEATLFG+EKG+FTGA  AQAGKFEQA  GT+LLDE++EMPL LQA
Sbjct: 181 PFVAINCAAIPESLLEATLFGYEKGAFTGANQAQAGKFEQAQNGTLLLDEVTEMPLALQA 240

Query: 241 KLLRVLQEREVERVGARKPIQLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWRP 300
           KLLRVLQEREVERVG ++P++LDIRVVAT+NRD+A  VA G FREDL+YRL+VFPL    
Sbjct: 241 KLLRVLQEREVERVGGKQPVRLDIRVVATSNRDMAEAVAKGIFREDLYYRLNVFPLLIPA 300

Query: 301 LRERPADIIPLAERLLNNHVKKMKHAQAGLSAEAQACLIAYPWPGNVRELDNAIQRALIL 360
           LR+RP D++PLA   L +   K       L+  A+  L  + WPGNVREL N +QRALIL
Sbjct: 301 LRQRPDDVVPLARHFLADQGGKSGRPGLLLTPAAEQALRVHSWPGNVRELVNVMQRALIL 360

Query: 361 QQGGLIQPQDFCLAMGSG----AAP-----------LPTLAP-TPVVVEAETAGAL---- 400
             G  +      L    G    AAP           +P LAP  P  +  E  GAL    
Sbjct: 361 APGDQVDAAHLHLVARPGAPAAAAPAYVPPPPVMMEVPQLAPQAPQAISVEEDGALQSGG 420

Query: 401 --GDDLRRREFQMIIDTLRSERGRRKEAAERLGISPRTLRYKLAQMRDAG 448
              D ++  E ++I++TL S  G RK A E+LGIS RTLR+KL Q R AG
Sbjct: 421 KKADSIKDWERELILETLASVGGSRKLAVEKLGISERTLRHKLRQYRLAG 470