Pairwise Alignments

Query, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 455 a.a., AAA-family response regulator flbD from Caulobacter crescentus NA1000

 Score =  329 bits (844), Expect = 1e-94
 Identities = 187/392 (47%), Positives = 259/392 (66%), Gaps = 11/392 (2%)

Query: 64  LLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALIELVVRHALGVIP 123
           L+    A + ++PV+         RA +A++ GA +++  P  P A +   V  A+    
Sbjct: 60  LIAANEAERMRVPVVACGVDADPMRAANAIKAGAKEFI--PLPPDAELIAAVLAAV---- 113

Query: 124 PSDGEGPIAF-EPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSTRAKQPF 182
            +D E P+   +PA  Q+++LA +VA S++++LI+GESG+GKEV+ARY+H +S RAK PF
Sbjct: 114 -TDDEKPMVVRDPAMEQVIKLADQVAPSEASILITGESGSGKEVMARYVHGKSRRAKAPF 172

Query: 183 IAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQAKL 242
           I++NCAAIP+N+LE+ LFGHEKG+FTGA+A + GKFE+ADGGT+LLDEISEM + LQAKL
Sbjct: 173 ISVNCAAIPENLLESELFGHEKGAFTGAMARRIGKFEEADGGTLLLDEISEMDVRLQAKL 232

Query: 243 LRVLQEREVERVGARKPIQLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWRPLR 302
           LR +QERE++RVG  KP++++IR++AT+NRDLA  V  G FREDL YRL+V  L   PLR
Sbjct: 233 LRAIQEREIDRVGGSKPVKVNIRILATSNRDLAQAVKDGTFREDLLYRLNVVNLRLPPLR 292

Query: 303 ERPADIIPLAERLLNNHVKKMKHAQAGLSAEAQACLIAYPWPGNVRELDNAIQRALILQQ 362
           ERPAD+I L E  +  +       +  +SAEA+  LIA+ WPGNVREL+NA+ RA++L  
Sbjct: 293 ERPADVISLCEFFVKKYSAANGIEEKPISAEAKRRLIAHRWPGNVRELENAMHRAVLLSA 352

Query: 363 GGLIQPQDFCLAMGSGAAPLPTLA---PTPVVVEAETAGALGDDLRRREFQMIIDTLRSE 419
           G  I+     L  G   AP P +A      +  +A +   +G  +   E Q+IIDTL   
Sbjct: 353 GPEIEEFAIRLPDGQPMAPAPDVAVARGAQMAADAASRAFVGSTVAEVEQQLIIDTLEHC 412

Query: 420 RGRRKEAAERLGISPRTLRYKLAQMRDAGMDV 451
            G R  AA  LGIS RTLR KL +  DAG+ V
Sbjct: 413 LGNRTHAANILGISIRTLRNKLKEYSDAGVQV 444