Pairwise Alignments

Query, 319 a.a., pilus assembly protein from Pseudomonas simiae WCS417

Subject, 172 a.a., fimbrial protein from Vibrio cholerae E7946 ATCC 55056

 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 9/119 (7%)

Query: 198 RQPFAYDSSALRDPFHRLAVQVDHLKGRPARAPDFARPRGVLENLAVDQFEMVGTLSRGV 257
           R+PF     AL        VQ   L       P      G LE   + Q  + G +S G 
Sbjct: 61  REPFVLPKEAL--------VQNQPLAKADCWQPVPRAKNGPLERYPLHQLRLKGVMSSGG 112

Query: 258 QVFALLRA-SSKVHRLTVGDYLGPDHGRVTAIHERSVELVELFPDGQGAWLERPRTLVL 315
            + AL++  +  V ++  G Y+G ++G+VT + +  + + E  PDG G W +R   L L
Sbjct: 113 SISALVQTPAGSVVKVKAGQYVGINNGKVTRVDDNYLLINETLPDGLGCWNQRNVKLAL 171