Pairwise Alignments

Query, 592 a.a., flagellar M-ring protein FliF from Pseudomonas simiae WCS417

Subject, 538 a.a., flagellar M-ring protein FliF (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  248 bits (633), Expect = 5e-70
 Identities = 184/572 (32%), Positives = 298/572 (52%), Gaps = 65/572 (11%)

Query: 29  SEMTMLRQVGLMVGLA-ASVAIGFAVVLWSQQPDYRPLYGSLAGMDSKQIMETLAAADIA 87
           S ++M ++V  +VGLA  +V I F ++LW  +PDYR LY +LAG D+ ++++ L A  + 
Sbjct: 17  SRISMSQRV-FIVGLALVTVGIFFTLILWINRPDYRVLYSNLAGEDANRVVKLLQANKVP 75

Query: 88  YTVEPNSGALLVKADDVARARMKLAAAGVTPSDSNIGFEILDKDQGLGTSQFMEATRYRR 147
           Y +E + G +LV AD +   R+K+A  G       IGFEI D D  +G + F++   Y+R
Sbjct: 76  YKLENDGGTVLVPADKLYDLRIKVAGEGNLVGQG-IGFEIFD-DLKVGQTDFVQKINYQR 133

Query: 148 GLEGELARTISSLNNVKGARVHLAIPKSSVFVRDERKPSASVLVELFAGRSLEPGQVLAI 207
            L+GEL RTIS    V+ ARVHL IP  S+F+ +++KPSASV+V+L  G+ +E   V AI
Sbjct: 134 ALQGELIRTISEFPGVETARVHLVIPHRSLFIEEQQKPSASVVVKLREGKKMEAQDVQAI 193

Query: 208 VNLVATSVPELSKSQITVVDQKGNLLSDQAENSALTQ-AGKQFDYSRRVESMLTQRVHNI 266
           VNLV  +V  + +++++V D  G +L    E+ +L      Q +Y  R++  L +R+  +
Sbjct: 194 VNLVVMAVEGMDRNRVSVADTSGKILYYPTEDDSLQGLTTTQLEYKMRLQQNLERRIEEL 253

Query: 267 LQPVLGNDRYKAEVSADVDFSAVESTSEQFNPDQPALRSEQSTSEQRTAANGPPQGVPGA 326
           L PV+G  +  A+V+ADVDFS      E ++P++  +RSEQ + E               
Sbjct: 254 LYPVIGPGKVIAKVNADVDFSQRTIRRELYDPEKTVVRSEQRSEES-------------- 299

Query: 327 LSNQPPAPASAPQTTGGATASAGAIQPGQPLLDANGQQIMDPATGQPMLAPYPADKRNQS 386
                        T G A   AGA     P  +  G  I   A+ Q          R   
Sbjct: 300 -------------TRGRANLEAGA-----PDANFRGDGISGSASTQE-------GTRETR 334

Query: 387 TKNFELDRSISHTKQQQGRVNRLSVSVVVDDQVKVNAADGAVTRAPWSADELARFTRLVQ 446
           T NFE+++   +     G ++RLSV+V+VD   +  AADG  T  P +A+E+ R  +LV 
Sbjct: 335 TTNFEINKEEQNIVANVGDLSRLSVAVIVDGTYE-KAADGTYTFVPRNAEEMQRIRQLVS 393

Query: 447 DAVGFDASRGDSVSVINMPFSAERGEVIAEPAFYSQ---PWFWDIVKQVLGVLFILVLVF 503
            AVG+D +RGD+V V ++ F    G  + + A   Q    +   + K +L  L + + + 
Sbjct: 394 SAVGYDRARGDTVEVNSISFG---GPDLPQEASLPQLFLDYALRLGKPLLNALLVFLFLL 450

Query: 504 GVLRPVLNNITGNGKKQLALAGGDVELGGMGGLDG-ELANDRVSL--GGPQSILLPSPSE 560
            V+RPV+          +AL    VE   + GL+G     +R++L  G  +   L +  +
Sbjct: 451 LVVRPVV----------MALIRPKVEGEMIEGLEGLPAGEERLALIEGDEEVDALDALRK 500

Query: 561 GYDAQLNAIKSLVAEDPGRVAQVVKEWINADE 592
             D + +A++ L  ++  +   +++ W+  DE
Sbjct: 501 IEDIKAHAMQ-LAEQNMDQAVGIIRSWLKNDE 531