Pairwise Alignments

Query, 572 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 244 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score = 80.1 bits (196), Expect = 9e-20
 Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 2/129 (1%)

Query: 1   MSALAPVLEPLTILIAEDSAADLLLLSTIVRRQGHQVLTATNGAEAVDVFSRERPQLVLM 60
           MS+ A   E   ILI +D A    LL   +  QG++V T  N  +   + SRE  QLV++
Sbjct: 1   MSSTAQANEGEKILIVDDDARLRRLLERFLDEQGYRVRTVENTEQMDRLLSRELFQLVVL 60

Query: 61  DALMPVMDGFEAARRIKQLAGEELVPLIFLTSLRESEALAQCLDAGGDDFLPKPYNQLIL 120
           D +MP  DG  A RR+++  G   +P+I LT+  +  +  Q L+ G DD+L KP+N   L
Sbjct: 61  DLMMPGEDGLSACRRLRE--GNNQIPIIMLTAKGDEASRIQGLEQGADDYLAKPFNPREL 118

Query: 121 AAKINAMDR 129
            A+I A+ R
Sbjct: 119 LARIRAVLR 127