Pairwise Alignments

Query, 217 a.a., pilus assembly protein from Pseudomonas simiae WCS417

Subject, 338 a.a., pilus assembly protein PilM from Vibrio cholerae E7946 ATCC 55056

 Score = 51.6 bits (122), Expect = 2e-11
 Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 1/163 (0%)

Query: 15  GVDINDTAIRLIELGRSPSGFNIQGYVTQALPAQTVVDGTLLDLEGVGRALRSAWSRLST 74
           G+DI   +I+   L      + + GY    + A    D   LD + + + L+     L  
Sbjct: 8   GIDIGHHSIKAAVLKPMGDTYALVGYEELLVTADIFTDNHTLDYQKIVKKLKELKKGLPL 67

Query: 75  SVRGAAAAVAGPSVITRMIDLEAGLTDDEMAWMIQMEADQYIPYPLDDVAIDF-QVRGPT 133
                A A+   +VI++++ +++ L   E+ + +        P+P++++++DF +V   +
Sbjct: 68  FSHKVAIAIPDSAVISKVLQIDSDLEQRELEFAVYQAFSHQSPFPVEELSLDFVKVTEKS 127

Query: 134 ALDPNRVEVLLAACLKEQVEAREAVLALAGLVPKVIDVEAFAL 176
               +     + A  K+ V++R   +  AG  P ++DV+  +L
Sbjct: 128 LARSSTTTFQVYATKKDVVDSRLHAVKKAGFEPVLMDVQVHSL 170