Pairwise Alignments

Query, 217 a.a., pilus assembly protein from Pseudomonas simiae WCS417

Subject, 359 a.a., type IV pilus assembly protein PilM (RefSeq) from Shewanella sp. ANA-3

 Score =  116 bits (290), Expect = 6e-31
 Identities = 62/179 (34%), Positives = 104/179 (58%)

Query: 1   MAKGFFTGKARTLLGVDINDTAIRLIELGRSPSGFNIQGYVTQALPAQTVVDGTLLDLEG 60
           M    +  +A  ++G+DI    ++ I L ++  G+ I  +    +    + D  + D + 
Sbjct: 1   MLSNLWKRQAPQMVGIDIGSHEVKAILLSKTADGYKILSHAAVPVKKGAINDHDIRDADA 60

Query: 61  VGRALRSAWSRLSTSVRGAAAAVAGPSVITRMIDLEAGLTDDEMAWMIQMEADQYIPYPL 120
           V   L+     L  SV+ AA AV+G +V+T++I ++A L+++EM   I++EAD  IPY L
Sbjct: 61  VVECLKQIKRILPKSVKYAAVAVSGSAVMTKVIYMDASLSEEEMEAQIEIEADNLIPYSL 120

Query: 121 DDVAIDFQVRGPTALDPNRVEVLLAACLKEQVEAREAVLALAGLVPKVIDVEAFALARA 179
           D+V+IDF+     + DP++V+VLL+AC  + ++AR   L    L  KV+DVE +AL RA
Sbjct: 121 DEVSIDFETLNVNSTDPSKVDVLLSACRTDNIDARVDALDEVELETKVVDVEGYALGRA 179