Pairwise Alignments

Query, 709 a.a., flagellar biosynthesis protein FlhA from Pseudomonas simiae WCS417

Subject, 703 a.a., flagellar biosynthetic protein FlhA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  549 bits (1414), Expect = e-160
 Identities = 300/684 (43%), Positives = 442/684 (64%), Gaps = 17/684 (2%)

Query: 28  LLVMLAMMMLPMPPFLLDVFFTFNIALSVVVLLVCVYALRPLDFAVFPTILLVATLLRLA 87
           ++ +L +M++P+P F LD+    +I+LS+V+L+  ++ + PL+F++FP++LLV TLLRLA
Sbjct: 28  VVTILFVMLVPLPTFFLDILLCCSISLSLVILVTSMFMMSPLEFSIFPSLLLVTTLLRLA 87

Query: 88  LNVASTRVVMLHGQDGHAAAGKVIQAFGEVVIGGNYVVGIVVFAILMIINFVVVTKGAGR 147
           LNVASTR+++LHG +G  AAG+VI+AFGE V+GG+YV+G V+F IL I+N  V+T G  R
Sbjct: 88  LNVASTRLILLHGDEGTDAAGEVIRAFGEFVVGGSYVIGAVIFMILFILNKNVITAGTTR 147

Query: 148 ISEVSARFTLDAMPGKQMAIDADLNAGLIDQNQAKSRRLEVAQEAEFYGSMDGASKFVRG 207
           I+EV+ARFTLDAMPGKQMAI+ADLNAGLID+ +A  RR  + +EA+FYG+MDGA KFV G
Sbjct: 148 IAEVAARFTLDAMPGKQMAIEADLNAGLIDETEANERRKNIRKEADFYGAMDGAGKFVSG 207

Query: 208 DAIAGLLILFINLIGGMAVGIFQHGMTFGDAGKVYALLTIGDGLVAQLPSLLLSTAAAIM 267
           D  AG+ I  IN+IGG+ VGI Q  M + DA   Y LLT+GDGLV+ +PS+++STAA I+
Sbjct: 208 DVNAGMFITLINIIGGLLVGIIQKDMPWRDALTTYTLLTVGDGLVSTIPSIIVSTAAGII 267

Query: 268 VTRASGSEDMGKQISRQMFASPKALAVAAGIMAIMGIVPGMPHVSFLSMAAMAAGGAYLF 327
           V+RA+    MG++   Q+  + +A+ + +G++ +  +VPG+P V FL  +A     A L 
Sbjct: 268 VSRAASEAKMGEEFLGQLTYNSRAMRLVSGVLLLFALVPGLPTVPFLIFSASLFFFAKLL 327

Query: 328 WKK-----QNAVKVQAQQEIARQQELLPSPARAQETKELGWDDVTPIDMIGLEVGYRLIP 382
             +     Q   K    +    + + L +P   Q         + P+D + LEVGY LIP
Sbjct: 328 GDRDGDEAQGDAKRAGGKAAKGKGDSLDTPEEVQA--------LLPLDALELEVGYGLIP 379

Query: 383 LVDRNQGGQLLARIKGVRKKLSQDLGFLMPTVHIRDNLDLAPSAYRLTLMGVILAEAEIY 442
           LVD  Q G LL RI+ +R++ + D+G ++P++H+RDNL L P  Y L + G  +  AEI 
Sbjct: 380 LVDEEQNGNLLTRIRSIRRQFALDMGVVIPSLHLRDNLQLKPGQYALLIKGNQVTSAEIL 439

Query: 443 PDRELAINPGQVFGSLNGITAKDPAFGLDAVWIEISQRSQAQSLGYTVVDASTVVATHLN 502
            D  LA++PG     + GI  ++PAF L A+WI  SQ+ +A   GYTVVD STV+ATHL 
Sbjct: 440 IDHLLAMDPGTARHRIQGIETREPAFNLPALWIPESQKEEAMLAGYTVVDPSTVIATHLT 499

Query: 503 QILYKHSHELIGHEEVQQLMGLLAKASPKLAEELVPGVLSLSQLLKVLQALLAEQVPVRD 562
           ++  +H  E +G +EVQ L+  L+K +PK  EELVPGVLSL  + KVLQ L+ E V VRD
Sbjct: 500 EVFRRHLSEFLGRQEVQGLLDNLSKHAPKAVEELVPGVLSLGVVQKVLQNLVRENVSVRD 559

Query: 563 IRSIAEAIANNAAKSQDTAALVAAVRVGLSRAIVQSIVGLDSELPVITLEPRLEQILLNS 622
           + S+ E +A+     ++   L   VR  L+R+IV+  +  +  LP+ITL+  +E+ L +S
Sbjct: 560 LLSVVETLADYGPAIKNPDTLTEYVRERLARSIVKPHMDSEGTLPIITLDANVERTLQDS 619

Query: 623 IQKAGQGQEEGVLLEPSMAEKLQRSLIDAAQRQ-EMQGQPVILLVAGPVRAMLSRFGRLA 681
           I++   G    + L PS A++L +S+    +      GQPV+L   G  R  L++     
Sbjct: 620 IRQTEGGAY--LALNPSTAQRLIQSVNTQVENAVGTDGQPVVLTQPG-TRPHLAQLLMRF 676

Query: 682 VPNLHVLAYQEIPDNKQVTIVATV 705
           +PN+ VL+  EIP + ++  V  V
Sbjct: 677 LPNIPVLSQAEIPPDIRLQAVGNV 700