Pairwise Alignments

Query, 735 a.a., chemotaxis protein CheA from Pseudomonas simiae WCS417

Subject, 693 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

 Score =  340 bits (871), Expect = 2e-97
 Identities = 232/721 (32%), Positives = 362/721 (50%), Gaps = 51/721 (7%)

Query: 11  QDFLVEAGEILEQLSEQLVELESRPDDANLLNAIFRGFHTVKGGAGFLQLHELVECCHIA 70
           + F  EA E+LEQL + L++LE  PDD +L+++ FR  HT+KG         +    H  
Sbjct: 8   ETFRQEAQELLEQLEQALLDLEHAPDDGDLIDSAFRALHTIKGSGSMFGFDAVAAFTHHV 67

Query: 71  ENVFDILRKGERHVDSELMDVILEALDAVNGMFSEVRERAPITAATPELLAALARYAEPA 130
           E  FD++RKG+     EL+ V L A D +  +  +     P +A    +L  L    + +
Sbjct: 68  ETAFDLVRKGKVTPSRELIAVALAAKDRMRLLIEQ--PETPESAEGDAILRDLKAIVDAS 125

Query: 131 DLSAAPVAEAAPEPVAEAEPDVTDSEFEQLLNSLSAVKAEAEAPAAAVAAPTSEDITDAE 190
           DL +A     AP    E   ++T              +        A+A  T+  +    
Sbjct: 126 DLPSAGEGGDAPVAAREQPAEIT-------------WRIRFRLARDAMAMGTNPLL---- 168

Query: 191 FESLLDQLHGKGQFAADAVT---PAAVSEAPAAPTANANTDITDDEFEALLDQLHGKGTF 247
              LLD+L   G     A+T   P+     P+      +  +T  +    ++ +     F
Sbjct: 169 ---LLDELRTLGSATIVALTGEVPSLEVLVPSDCHLAWDVMLTTSQPRTAIEDVF---MF 222

Query: 248 VADALPEVAATAAAPAAASAAPAGDGLISDHEFESLLDELHGKGKFSEVAPAATVATAAP 307
           V D + E++               D L S  E   + + L  +G  ++ A    V+   P
Sbjct: 223 VIDDM-ELSI--------------DLLESGEEDRRIGEILVERGDVAQEAVDTAVSRQLP 267

Query: 308 VAAKAAAPAPAPAAKPAPAAAPAPARAAAAPVADKPASEAETTVRVDTARLDDIMNMVGE 367
           +             K   A A          V  K A     ++RV   RLD++M+ VGE
Sbjct: 268 LGTLLVESGNLSPDKLTSALAEQQHLRTETKVVAKGAD----SIRVPAERLDELMDRVGE 323

Query: 368 LVLVRNRLVRLGLSSGDEAMQKAVSNLDVVTADLQTAVMKTRMQPIKKVFGRFPRLVRDL 427
           LV+ ++RL ++  S  D  ++     ++ +  +L+   M  RM PI  +FGRF RLV DL
Sbjct: 324 LVIAQSRLTQVAASINDMQVKAIAEEIERLAHELRDTTMGVRMVPISSLFGRFRRLVHDL 383

Query: 428 ARQLKKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGVETPEEREASGKSRNGKV 487
           A  L K+I L   GEET+LDK ++E L DPL+HL+RN++DHG+ETPE R+ +GK   G++
Sbjct: 384 AHDLGKQIELTTFGEETELDKTVIERLNDPLIHLIRNSIDHGLETPEGRKEAGKPPAGRI 443

Query: 488 ILAAEQEGDHILLSITDDGKGMDPAILRNIAVKRGVMDKDAADRLTDSECYNLIFAPGFS 547
            L+A   G  +L+SI DDG+G+D A ++  A ++G++      +L+D++ + +IF  GFS
Sbjct: 444 TLSARHSGAEVLVSIIDDGRGLDRARIQARAEEQGLLAPGV--KLSDNDLFQVIFQAGFS 501

Query: 548 TKTEISDVSGRGVGMDVVKTKISQLNGSINIYSTKGQGSKIVIKVPLTLAIMPTLMVMLG 607
           T   ++ +SGRGVGMDVVK  I  L G I+I ST G+G+++ +++PLTLAI+  L+V +G
Sbjct: 502 TAKVVTSLSGRGVGMDVVKRTIEGLRGKIDIASTPGKGTELTLRLPLTLAIIDGLLVRVG 561

Query: 608 NQAFAFPLVNVNEIFHLDLSRTNVVDGQEVVIVRDKALPLFYLKRWLVASAKHEEQREGH 667
              +  PL  V E   L         G+  + +R   +P   L+     SA  +  ++  
Sbjct: 562 KARYVLPLSAVEECVELSAEEDGRSRGRSFLNIRGDLVPFLRLRELFQVSAPADPYQK-- 619

Query: 668 VVILSVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRIALILDVPSML 727
           VVI+S G  R+G VVDQ++G  + VIK L K+       SGATI GDG +ALILD+  ++
Sbjct: 620 VVIVSSGEFRVGLVVDQVIGNHQTVIKSLSKLHADVETFSGATILGDGAVALILDIGHLV 679

Query: 728 K 728
           K
Sbjct: 680 K 680