Pairwise Alignments

Query, 820 a.a., peptidase from Pseudomonas simiae WCS417

Subject, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

 Score =  602 bits (1553), Expect = e-176
 Identities = 338/809 (41%), Positives = 476/809 (58%), Gaps = 40/809 (4%)

Query: 10  YSIVAIVCGLLLVFSGAYLYLSPGLPSVEALRSIQLQIPLRVYSSDEKLIAEFGEMRRTP 69
           +S++ I+ G+  +F G Y Y+   LP V  LR +QLQ P++V+S D KLIA+FGE RR P
Sbjct: 20  FSLICIILGVTTIF-GFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQFGEKRRIP 78

Query: 70  IRFADIPPNFISALLSAEDDNFANHYGVDPSSLVRAATQLVKSGHIQSGGSTITMQVAKN 129
           ++  ++P   I A+++ ED  +  HYG DP  + RAA  ++ SG    G STIT Q+A+N
Sbjct: 79  LKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGASTITQQLARN 138

Query: 130 FFLTSERSFSRKATEILLALQIERQLTKDEILELYVNKIYLGNRAYGIEAASQVYYGKSI 189
           FFL++E+   RK  EI +A+ IE+ L+K EILELY+NKIYLG R+YG+ AA+Q Y+GK +
Sbjct: 139 FFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAAQAYFGKEV 198

Query: 190 RDASLAQMAMIAGLPKAPSRFNPLANPARSKERRDWILGRMYKLGKIDQAAYESAIAEPL 249
           +D +L ++A+IAGLPKAPS  NP+ +  R+  RR+ +L RM     I +A Y++A AEP+
Sbjct: 199 KDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYDAARAEPV 258

Query: 250 NASYHVPTPEVNAPYIAEMARAEMVGRYGSE-AYTEGFRVTTTVPSNLQEIANDSVHSGL 308
              YH    E+NAPY+AE+ARA MV RYG E AYT G  V TTV S LQ  AN +  + L
Sbjct: 259 LPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAANQAAINNL 318

Query: 309 ITYDQRHGYRGPESRLPGKTLSAWTTE-----LGKQRAISGLEPAIVTQVKKDGLQVLTR 363
           + YD+RHGYRG E  L      AW++      L  +     + PA V  V++   QV  +
Sbjct: 319 LAYDERHGYRGAEKELWQVNQPAWSSTQLSEYLSNEPTYGDMFPAAVLSVEEKSAQVWVK 378

Query: 364 T-GEAHVAWDSMKWARPFLNTNSMGALPKQPSDVAQVGDLIRVQRQKDD----SLKFSQV 418
           + G   +AW+ M WAR F+N +  G LPK  ++    G  I V+ +  D    + K +QV
Sbjct: 379 SYGVQTIAWEDMNWARRFINDDRQGPLPKSANEFLAAGQQIWVRPRTQDGAITAWKLTQV 438

Query: 419 PLAQGALVSLDPQNGAIRALVGGFAFEQSNYNRATQAKRQPGSSFKPFIYSAALDNGYTA 478
           P A  A V+++P+NGA+ ALVGGF F  + +NRATQ+ RQ GSS KPFIYSAAL+ G T 
Sbjct: 439 PNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTL 498

Query: 479 ASLVNDAPIVFVDEYLDKVWRPKNDTNTFLGPIRIREALYKSRNLVSIRLLQAMGVGKTI 538
           A+L+NDAPI   DE     WRPKN   T+ GP R+R  L +S+N++++R+L+ +G+ +T 
Sbjct: 499 ATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETR 558

Query: 539 DYMTRFGFSKSDLPPNLSLALGTATLTPMEIATGWSTFANGGYKIAPYLIDKIESRNGDT 598
           +Y+TRFGF    LP + ++ALG  +LTP+++A G+S FAN GY + P+ I ++E+  G+ 
Sbjct: 559 EYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNI 618

Query: 599 LFTANPPRVPGDVVNGVAATDGLAAPSNGGITIEPAPGTTPATNAAATEPQTPAVAERIV 658
            F+A P      VV     +  L   +        AP      NA  T      +   I 
Sbjct: 619 EFSAEP-----KVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREM---LYSNIW 670

Query: 659 DGRTTYILNSILEDVIKKGTGRRALALGRPDIAGKTGTTNESKDAWFSGYNADYVTTVWT 718
            G           D    GTG RA AL R DI GKTGTTN+SKDAW++GY    V   W 
Sbjct: 671 GG------GEWSSDTGWNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWV 724

Query: 719 GY-DQPESLGR-------------REFGGTVALPIWMSYMGAALKDKPPHTQPEPEGILS 764
           G+ D   +LG+              E GG  ALP W+ +M  AL+D P   +  P  I  
Sbjct: 725 GFDDHSRNLGKTAPNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQQKAVPNNIAR 784

Query: 765 LRIDPVSGRAASPSTPNAYFELFKSEDTP 793
           +RID  +G   +    ++ FE F++   P
Sbjct: 785 VRIDRDTGLLTNKLDSSSMFEYFEAGTEP 813